RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 HLA-GP17693 338 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 CD40P25942 277 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 SUPT4H1P63272 117 aaKnown RBP11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 ZNF146Q15072 292 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 C20orf204Q6ZNR8 217 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 SPERTQ8NA61 448 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 POC1AQ8NBT0 407 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 GRPEL2Q8TAA5 225 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 RND1Q92730 232 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 RDH5Q92781 318 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 DPCDQ9BVM2 203 aaPredicted RBP11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 TMPRSS13Q9BYE2 586 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 SPEF1Q9Y4P9 236 aa11.65□□□□□ -0.54
SNRNP27-201ENST00000244227 IGLV3-9A0A075B6K5 115 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 RGS13O14921 159 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 DEGS1O15121 323 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 DUS4LO95620 317 aaKnown RBP11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 THBDP07204 575 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 PPP3CBP16298 524 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 SNRPD2P62316 118 aaKnown RBP11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 HOXA4Q00056 320 aaPredicted RBP11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 UNQ6494/PRO21346Q6UXR6 183 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 USB1Q9BQ65 265 aaKnown RBP11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 CHMP1AQ9HD42 196 aaPredicted RBP11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 SLC23A1Q9UHI7 598 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 DUSP13Q9UII6 198 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 MEMO1Q9Y316 297 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 HSPB11Q9Y547 144 aa11.65□□□□□ -0.55
SNRNP27-201ENST00000244227 TRBV6-6A0A0A6YYG2 114 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 DBX1A6NMT0 343 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 NXPH2O95156 264 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 SFT2D2O95562 160 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 OR2H2O95918 312 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 ZNF44P15621 663 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 VAMP1P23763 118 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 GMFBP60983 142 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 SRSF4Q08170 494 aaKnown RBP11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 LGALSLQ3ZCW2 172 aaPredicted RBP11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 LIN54Q6MZP7 749 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 CLEC18BQ6UXF7 455 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 OR5M8Q8NGP6 311 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 CASTOR1Q8WTX7 329 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 FXYD6Q9H0Q3 95 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 PRORYQ9H606 182 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 ZZEF1O43149 2961 aa11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 HEATR1Q9H583 2144 aaKnown RBP11.64□□□□□ -0.55
SNRNP27-201ENST00000244227 TRGV8A0A0C4DH27 118 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 ZSCAN5BA6NJL1 495 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 WNT9BO14905 357 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 PTBP3O95758 552 aaKnown RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 CTSDP07339 412 aaPredicted RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 FCGR2CP31995 323 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 ECI1P42126 302 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 IGSF11Q5DX21 431 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 NEK7Q8TDX7 302 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 ZCCHC14Q8WYQ9 949 aaKnown RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 PHB2Q99623 299 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 DHRS9Q9BPW9 319 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 PAIP2BQ9ULR5 123 aaKnown RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 DPRXA6NFQ7 191 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 SCTP09683 121 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 PGAM2P15259 253 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 CD200P41217 278 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 CA7P43166 264 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 RBM39Q14498 530 aaKnown RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 HERPUD1Q15011 391 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 SPRNQ5BIV9 151 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 SHEQ5VZ18 495 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 C11orf88Q6PI97 169 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 VHLLQ6RSH7 139 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 KDF1Q8NAX2 398 aaPredicted RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 OR2Z1Q8NG97 314 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 SYT3Q9BQG1 590 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 RIMS4Q9H426 269 aaPredicted RBP11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 UFSP2Q9NUQ7 469 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 ATP23Q9Y6H3 246 aa11.63□□□□□ -0.55
SNRNP27-201ENST00000244227 CADP27708 2225 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 IGKV1-6A0A0C4DH72 117 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 PLSCR5A0PG75 271 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 SIRPB1O00241 398 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 CCSO14618 274 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 SLC34A2O95436 690 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 KLF3P57682 345 aaPredicted RBP11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 SPIN3Q5JUX0 258 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 WFDC8Q8IUA0 241 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 GAPTQ8N292 157 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 ASCC1Q8N9N2 400 aaKnown RBP11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 ST6GALNAC3Q8NDV1 305 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 PLPPR1Q8TBJ4 325 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 ASB13Q8WXK3 278 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 MOB3AQ96BX8 217 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 GON7Q9BXV9 100 aa11.62□□□□□ -0.55
SNRNP27-201ENST00000244227 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms