RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 GSG1LQ6UXU4 331 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 VRK1Q99986 396 aaPredicted RBP7.41□□□□□ -1.22
VPS4B-201ENST00000238497 GLRX2Q9NS18 164 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 ELOVL5Q9NYP7 299 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 JKAMPQ9P055 326 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 OR14J1Q9UGF5 321 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 OR6C6A6NF89 314 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 A6NLC8 198 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 SULT1C2O00338 296 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 LDLRAD4O15165 306 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF735P0CB33 412 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 OR5H8P0DN80 308 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF44P15621 663 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 ZNF16P17020 682 aaPredicted RBP7.41□□□□□ -1.22
VPS4B-201ENST00000238497 RAB6AP20340 208 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 UBE2NP61088 152 aaKnown RBP7.41□□□□□ -1.22
VPS4B-201ENST00000238497 CLVS2Q5SYC1 327 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 LYG2Q86SG7 212 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 SPERTQ8NA61 448 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 SECTM1Q8WVN6 248 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 SULT4A1Q9BR01 284 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 UFSP2Q9NUQ7 469 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 AK3Q9UIJ7 227 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 ZFHX3Q15911 3703 aa7.41□□□□□ -1.22
VPS4B-201ENST00000238497 TNFSF12O43508 249 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 SS18L1O75177 396 aaPredicted RBP7.4□□□□□ -1.22
VPS4B-201ENST00000238497 SCAND1P57086 179 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 FAM3AP98173 230 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 S100PBPQ96BU1 408 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 CXorf58Q96LI9 332 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 ABCA2Q9BZC7 2435 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.4□□□□□ -1.22
VPS4B-201ENST00000238497 CYTIPO60759 359 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 CST2P09228 141 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 FCGR2CP31995 323 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 FABP6P51161 128 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 ERVS71-1P61550 626 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 PRDX4Q13162 271 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 LRRC20Q8TCA0 184 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 PLPPR2Q96GM1 343 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 HS3ST6Q96QI5 342 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 WDR13Q9H1Z4 485 aa7.4□□□□□ -1.22
VPS4B-201ENST00000238497 HRNRQ86YZ3 2850 aaPredicted RBP7.4□□□□□ -1.23
VPS4B-201ENST00000238497 LOC390937A0A1W2PQ73 354 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 F8VVB4 439 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 F8VWA3 439 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 AGPAT2O15120 278 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 LILRA1O75019 489 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 DIRAS3O95661 229 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 CELA3BP08861 270 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 GSTP1P09211 210 aaKnown RBP7.4□□□□□ -1.23
VPS4B-201ENST00000238497 PRKACAP17612 351 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 CCKARP32238 428 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 NUP62P37198 522 aaPredicted RBP7.4□□□□□ -1.23
VPS4B-201ENST00000238497 QRFPP83859 136 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 DAZAP2Q15038 168 aaPredicted RBP7.4□□□□□ -1.23
VPS4B-201ENST00000238497 C22orf34Q6ZV56 151 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 OSR2Q8N2R0 312 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 OR13G1Q8NGZ3 307 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 MUCL1Q96DR8 90 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 GSX2Q9BZM3 304 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 PLSCR4Q9NRQ2 329 aa7.4□□□□□ -1.23
VPS4B-201ENST00000238497 HIVEP2P31629 2446 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 A0A0A6YYH2 397 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 IGKV1-12A0A0C4DH73 117 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 A0A0U1RQV5 110 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 hCG_1807616A0A1W2PRN6 198 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 A6NJ64 397 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 G3V3Q6 166 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 FBXO24O75426 580 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 CGAP01215 116 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 IGKV1D-12P01611 117 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 RLN2P04090 185 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 BCL3P20749 454 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 PRKACBP22694 351 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 HOXC12P31275 282 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 SPICQ8N5J4 248 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 ZSCAN4Q8NAM6 433 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-201ENST00000238497 C1orf147Q96MC9 270 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-201ENST00000238497 DSCAMO60469 2012 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 ZNF816-ZNF321PA0A0X1KG74 233 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 PLSCR5A0PG75 271 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 HSPA12AO43301 675 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 HERV-K104P61576 105 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 HNF4GQ14541 408 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 KCNMB1Q16558 191 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 TFAP2EQ6VUC0 442 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 OR11L1Q8NGX0 322 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 RNASE11Q8TAA1 199 aaKnown RBP7.39□□□□□ -1.23
VPS4B-201ENST00000238497 PERPQ96FX8 193 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 C5orf66Q9H5L9 145 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 DUSP13Q9UII6 198 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 A0A1W2PPR1 153 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 TRAPPC2LH3BP13 241 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 SYNGR1O43759 233 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 SCGNO76038 276 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 UBBP0CG47 229 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 PDZK1IP1Q13113 114 aa7.39□□□□□ -1.23
VPS4B-201ENST00000238497 LTC4SQ16873 150 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms