RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SPRY1O43609 319 aaPredicted RBP12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 P2RY1P47900 373 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 MLF1P58340 268 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 GABREP78334 506 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 HNF4GQ14541 408 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 PCK2Q16822 640 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 RNASE8Q8TDE3 154 aaKnown RBP12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TBX15Q96SF7 602 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 PECRQ9BY49 303 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 LHFPL6Q9Y693 200 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 MUC22E2RYF6 1773 aaPredicted RBP12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 PPP5D1E7EU14 171 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 NPIPB7O75200 414 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TK1P04183 234 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 LINC00614P0C842 121 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 CEACAM6P40199 344 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TNFSF10P50591 281 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TOMM20LQ6UXN7 152 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 SERINC1Q9NRX5 453 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 FUT9Q9Y231 359 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF407Q9C0G0 2248 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 C20orf202A1L168 122 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 FAM24AA6NFZ4 105 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 FOLR1P15328 257 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 MSX1P28360 303 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 LPAR2Q9HBW0 351 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 ABCA7Q8IZY2 2146 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 FIGNL2A6NMB9 653 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 RTN4IP1Q8WWV3 396 aaPredicted RBP12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 CST7O76096 145 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 HPRT1P00492 218 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 GUSBP08236 651 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 CEACAM1P13688 526 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 CLN3Q13286 438 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 CHST11Q9NPF2 352 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 KLHL13Q9P2N7 655 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 RNF24Q9Y225 148 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 FRYLO94915 3013 aa12.35□□□□□ -0.43
PCDHB3-201ENST00000231130 VSTM2BA6NLU5 285 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 TP53I11O14683 189 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 PHF1O43189 567 aaPredicted RBP12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 TSPAN2O60636 221 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 GNMTQ14749 295 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 TMEM234Q8WY98 164 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 VPS25Q9BRG1 176 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 LRRC61Q9BV99 259 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 IGKV3-11P04433 115 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF17P17021 662 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 RUNX1Q01196 453 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 IL15RAQ13261 267 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 LCN15Q6UWW0 184 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 SLC16A14Q7RTX9 510 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 UEVLDQ8IX04 471 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 GINS3Q9BRX5 216 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 MRPS18CQ9Y3D5 142 aaKnown RBP12.34□□□□□ -0.43
PCDHB3-201ENST00000231130 LOC102724200A0A096LPH7 203 aaPredicted RBP12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 NSG1A0A0A6YYJ2 146 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 B4E171 279 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 M0QZK8 103 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 GGCTO75223 188 aaKnown RBP12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 CD55P08174 381 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 DBHP09172 617 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 LYL1P12980 280 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 TMEM11P17152 192 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 EPHA1P21709 976 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 RABIFP47224 123 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 GPR157Q5UAW9 335 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 DEGS2Q6QHC5 323 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 MS4A10Q96PG2 267 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF385AQ96PM9 386 aaKnown RBP12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 OR5B12Q96R08 314 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 LIME1Q9H400 295 aa12.33□□□□□ -0.43
PCDHB3-201ENST00000231130 A0A087WWC5 75 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 VEGFBP49765 207 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 YPEL5P62699 121 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 CMTM1Q8IZ96 169 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 PIGLQ9Y2B2 252 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 ARHGAP21Q5T5U3 1957 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 C2orf16Q68DN1 1984 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 CAPZBP47756 277 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF41P51814 821 aaPredicted RBP12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 MYBPHQ13203 477 aa12.33□□□□□ -0.44
PCDHB3-201ENST00000231130 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms