RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 Q8NFD4 153 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 EDARADDQ8WWZ3 215 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 POM121Q96HA1 1249 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 IER2Q9BTL4 223 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 C19orf12Q9NSK7 152 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 MIOXQ9UGB7 285 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 C3orf85A0A1B0GTC6 90 aa14.02□□□□□ -0.17
LTBR-201ENST00000228918 RAB5CP51148 216 aa14.02□□□□□ -0.17
LTBR-201ENST00000228918 NOVA1P51513 510 aaKnown RBP14.02□□□□□ -0.17
LTBR-201ENST00000228918 CPNE4Q96A23 557 aaPredicted RBP14.02□□□□□ -0.17
LTBR-201ENST00000228918 C11orf1Q9H5F2 150 aa14.02□□□□□ -0.17
LTBR-201ENST00000228918 PLSCR2Q9NRY7 297 aa14.02□□□□□ -0.17
LTBR-201ENST00000228918 STRAPQ9Y3F4 350 aaKnown RBP14.02□□□□□ -0.17
LTBR-201ENST00000228918 VPS13AQ96RL7 3174 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 PINLYPA6NC86 204 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 RPL36A-HNRNPH2H7BZ11 118 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 MPPED1O15442 326 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 C1QL1O75973 258 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 GDF1P27539 372 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 EIF2S3LQ2VIR3 472 aaKnown RBP14.01□□□□□ -0.17
LTBR-201ENST00000228918 AKIRIN2Q53H80 203 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 ACER2Q5QJU3 275 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 PEAR1Q5VY43 1037 aaPredicted RBP14.01□□□□□ -0.17
LTBR-201ENST00000228918 COLCA1Q6ZS62 124 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM185AQ8N0U4 392 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 HSD17B11Q8NBQ5 300 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 TMEM45BQ96B21 275 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 BOD1Q96IK1 185 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 CLCC1Q96S66 551 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 TCEAL7Q9BRU2 100 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 MRPS18CQ9Y3D5 142 aaKnown RBP14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A10PA6NDY2 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A18PA6NE21 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A16PA6NEW6 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A20PA6NIJ5 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A8PA6NJQ4 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A7PA6NKC0 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A22PA8MWA6 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A12PA8MX19 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A5PA8MXJ8 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A23PA8MXZ1 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 CDS2O95674 445 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A15PP0C7V4 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A13PP0C7W8 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A14PP0C7W9 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 FAM90A24PP0C7X0 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 ZNF44P15621 663 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 CBR1P16152 277 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 GFRA1P56159 465 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 SRPXP78539 464 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 EWSR1Q01844 656 aaKnown RBP eCLIP14.01□□□□□ -0.17
LTBR-201ENST00000228918 NRN1LQ496H8 165 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 Q6ZS49 121 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 KDF1Q8NAX2 398 aaPredicted RBP14.01□□□□□ -0.17
LTBR-201ENST00000228918 PCSK5Q92824 1860 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 EXTL1Q92935 676 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 C14orf79Q96F83 325 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 TMEM222Q9H0R3 208 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 TCFL5Q9UL49 500 aa14.01□□□□□ -0.17
LTBR-201ENST00000228918 C1orf196B1AJZ1 125 aa14□□□□□ -0.17
LTBR-201ENST00000228918 TRDCB7Z8K6 153 aa14□□□□□ -0.17
LTBR-201ENST00000228918 IGHV3-9P01782 118 aa14□□□□□ -0.17
LTBR-201ENST00000228918 S100A6P06703 90 aa14□□□□□ -0.17
LTBR-201ENST00000228918 TDGF1P13385 188 aa14□□□□□ -0.17
LTBR-201ENST00000228918 GNRHRP30968 328 aa14□□□□□ -0.17
LTBR-201ENST00000228918 AKR1C3P42330 323 aa14□□□□□ -0.17
LTBR-201ENST00000228918 GNMTQ14749 295 aa14□□□□□ -0.17
LTBR-201ENST00000228918 AWAT1Q58HT5 328 aa14□□□□□ -0.17
LTBR-201ENST00000228918 RPS10P5Q9NQ39 176 aa14□□□□□ -0.17
LTBR-201ENST00000228918 FAM86C1Q9NVL1 165 aa14□□□□□ -0.17
LTBR-201ENST00000228918 FRYLO94915 3013 aa14□□□□□ -0.17
LTBR-201ENST00000228918 DOCK10Q96BY6 2186 aa14□□□□□ -0.17
LTBR-201ENST00000228918 NKX2-6A6NCS4 301 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 PRH1P02810 166 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 BCL3P20749 454 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 CDCP2Q5VXM1 449 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 SLC23A3Q6PIS1 610 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 DPPA2Q7Z7J5 298 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 OR56B2PQ8NGI1 322 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 FGF23Q9GZV9 251 aaPredicted RBP13.99□□□□□ -0.17
LTBR-201ENST00000228918 SLC7A10Q9NS82 523 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
LTBR-201ENST00000228918 COL27A1Q8IZC6 1860 aaPredicted RBP13.99□□□□□ -0.17
LTBR-201ENST00000228918 B4E171 279 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 CER1O95813 267 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 TSPAN7P41732 249 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 RNF212Q495C1 297 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 TBC1D26Q86UD7 250 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 OR2C3Q8N628 320 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 HIST1H2BAQ96A08 127 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 TMEM56Q96MV1 263 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 PAPOLGQ9BWT3 736 aaKnown RBP13.99□□□□□ -0.17
LTBR-201ENST00000228918 EIF5A2Q9GZV4 153 aaKnown RBP13.99□□□□□ -0.17
LTBR-201ENST00000228918 SPACA1Q9HBV2 294 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 TMEM56-RWDD3S4R434 201 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 DMDP11532 3685 aa13.99□□□□□ -0.17
LTBR-201ENST00000228918 K7N7A8 449 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 NDUFS6O75380 124 aaKnown RBP13.98□□□□□ -0.17
LTBR-201ENST00000228918 AGAP20933 346 aa13.98□□□□□ -0.17
LTBR-201ENST00000228918 CYB561P49447 251 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms