RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 NR2C1P13056 603 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 EPHA1P21709 976 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 GUCA1AP43080 201 aaPredicted RBP12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 Q6ZPA2 131 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 CPEB2Q7Z5Q1 589 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 TMEM56Q96MV1 263 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 TMEM56-RWDD3S4R434 201 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 A0A087X0M5 115 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 A0A1B0GX30 115 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 FAM221AA4D161 298 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 MYF5P13349 255 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 DYNLT3P51808 116 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 TAS2R60P59551 318 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 HERV-K104P61576 105 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 PHYHD1Q5SRE7 291 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 OR5R1Q8NH85 324 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
SCNN1A-201ENST00000228916 IGHV1OR21-1A0A087WYE8 117 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 IGHV1OR15-9A0A0B4J2B8 117 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 LOC102723971A0A1B0GUV8 181 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 SSSCA1O60232 199 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 TLE4Q04727 773 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 BAXQ07812 192 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 EXT1Q16394 746 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 AKR1C8PQ5T2L2 129 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 BRICD5Q6PL45 260 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 ANKRD37Q7Z713 158 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 DMRTC2Q8IXT2 367 aaPredicted RBP12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 CARFQ8N187 725 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 OR2M3Q8NG83 312 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 TGIF2Q9GZN2 237 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 ARGFXA6NJG6 315 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 ATXN7O15265 892 aaPredicted RBP12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 PPYP01298 95 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 CD63P08962 238 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 RUNX1Q01196 453 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 FAM185AQ8N0U4 392 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 LILRB2Q8N423 598 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 PACRGQ96M98 296 aaPredicted RBP12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
SCNN1A-201ENST00000228916 LMO7DNF2Z398 122 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 TMEM50AO95807 157 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 OR8B8Q15620 311 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 DPPA2Q7Z7J5 298 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 TMEM54Q969K7 222 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 IGKV1-12A0A0C4DH73 117 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 TRBV11-1A0A0K0K1C0 115 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CLEC18AA5D8T8 446 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 MKRN2OSH3BPM6 223 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CST7O76096 145 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 IGKV1D-12P01611 117 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 MMP9P14780 707 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 LTBRP36941 435 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CD200P41217 278 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 PNRC1Q12796 327 aaPredicted RBP12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 SHBQ15464 509 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CMTM1Q8IZ96 169 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CLEC18CQ8NCF0 446 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 OR10G3Q8NGC4 313 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 METTL7AQ9H8H3 244 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 A0A1B0GU03 582 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 GNRHRP30968 328 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 IL2RGP31785 369 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 VAMP2P63027 116 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 CNN3Q15417 329 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 SPTSSAQ969W0 71 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 ZNF501Q96CX3 271 aaPredicted RBP12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 SIGLEC12Q96PQ1 595 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 MAGT1Q9H0U3 335 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 FGF21Q9NSA1 209 aa12.09□□□□□ -0.47
SCNN1A-201ENST00000228916 SDK1Q7Z5N4 2213 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 CLDN34H7C241 214 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 CYB5R3P00387 301 aaPredicted RBP12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 NDUFB7P17568 137 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 TAS2R30P59541 319 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 ID3Q02535 119 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 LBHQ53QV2 105 aaPredicted RBP12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 ZNF695Q8IW36 515 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 OSR2Q8N2R0 312 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 RNASE11Q8TAA1 199 aaKnown RBP12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 C2orf88Q9BSF0 95 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 PLEK2Q9NYT0 353 aa12.08□□□□□ -0.48
SCNN1A-201ENST00000228916 SEMA5BQ9P283 1151 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms