RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PAFAH1B2P68402 229 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 GGTLC2Q14390 218 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 MPV17LQ2QL34 196 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 FAM214BQ7L5A3 538 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 BGLAPP02818 100 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 PEBP1P30086 187 aaKnown RBP16.64■□□□□ 0.25
SMPD3-201ENST00000219334 ZNF528Q3MIS6 628 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 RAB5AP20339 215 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 DGAT2L7PQ6IED9 249 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 AKIP1Q9NQ31 210 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 ANXA10Q9UJ72 324 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 MRPS18BQ9Y676 258 aaKnown RBP16.64■□□□□ 0.25
SMPD3-201ENST00000219334 GEMIN2O14893 280 aaKnown RBP16.64■□□□□ 0.25
SMPD3-201ENST00000219334 CA11O75493 328 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 TMEM251Q8N6I4 163 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 PIPOXQ9P0Z9 390 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 CDC34P49427 236 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-201ENST00000219334 IL13RA2Q14627 380 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 OR2C3Q8N628 320 aa16.64■□□□□ 0.25
SMPD3-201ENST00000219334 COMMD1Q8N668 190 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 Q8WTZ3 238 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 SLC25A10Q9UBX3 287 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-201ENST00000219334 MAP1LC3B2A6NCE7 125 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 FAM24AA6NFZ4 105 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 SLC22A18ASQ8N1D0 253 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 OR10AC1Q8NH08 325 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 OR1L1Q8NH94 360 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 MAP1LC3BQ9GZQ8 125 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 C9orf170A2RU37 121 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 FGF5P12034 268 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 GNG4P50150 75 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 CTF1Q16619 201 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 MYPOPQ86VE0 399 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-201ENST00000219334 PRR33A8MZF0 331 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 CD200P41217 278 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 HLXQ14774 488 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-201ENST00000219334 ATG2BQ96BY7 2078 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 ICE1Q9Y2F5 2266 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 SF3B6Q9Y3B4 125 aaKnown RBP16.63■□□□□ 0.25
SMPD3-201ENST00000219334 IGHV1-45A0A0A0MS14 117 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 RPL31P62899 125 aaKnown RBP16.63■□□□□ 0.25
SMPD3-201ENST00000219334 Q1RN00 199 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 TSPO2Q5TGU0 170 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 FAHD2BQ6P2I3 314 aaPredicted RBP16.63■□□□□ 0.25
SMPD3-201ENST00000219334 FAHD2AQ96GK7 314 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 HARBI1Q96MB7 349 aa16.63■□□□□ 0.25
SMPD3-201ENST00000219334 MMP7P09237 267 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 GZMKP49863 264 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 CCL8P80075 99 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 TAGLNQ01995 201 aaKnown RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 MMDQ15546 238 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 DUSP18Q8NEJ0 188 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 SAP25Q8TEE9 199 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 OR2J1Q9GZK6 312 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 SCN1AP35498 2009 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 CTSDP07339 412 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 OR4D10Q8NGI6 311 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 LILRB1Q8NHL6 650 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 NOL4LQ96MY1 436 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 GDF15Q99988 308 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 RHOFQ9HBH0 211 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 IGHV3OR15-7A0A075B7D8 119 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 TRBV23-1A0A0A0MS06 115 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 A0A0J9YW62 118 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 ACP1P24666 158 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 PTTG1IPP53801 180 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 RAB32Q13637 225 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 SLC25A45Q8N413 288 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 ZNF385AQ96PM9 386 aaKnown RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 OPN3Q9H1Y3 402 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 PLAC1Q9HBJ0 212 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 PRNDQ9UKY0 176 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 DMKNQ6E0U4 476 aaPredicted RBP16.62■□□□□ 0.25
SMPD3-201ENST00000219334 ABHD14AQ9BUJ0 271 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 RREB1Q92766 1687 aa16.62■□□□□ 0.25
SMPD3-201ENST00000219334 IGKV3-7A0A075B6H7 116 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 UBE2L3P68036 154 aaKnown RBP16.61■□□□□ 0.25
SMPD3-201ENST00000219334 TBC1D26Q86UD7 250 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 CROCCQ5TZA2 2017 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 RPL13AP40429 203 aaKnown RBP16.61■□□□□ 0.25
SMPD3-201ENST00000219334 GABRA6Q16445 453 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 PDPNQ86YL7 162 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 GVQW1Q8N7I0 195 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 TMEM52Q8NDY8 209 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 ERVFRD-1P60508 538 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 ECSCRQ19T08 205 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 PLPPR5Q32ZL2 321 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 OR10A7Q8NGE5 316 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 RNF133Q8WVZ7 376 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 RAB33BQ9H082 229 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 GYPAP02724 150 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 ZNF429Q86V71 674 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 OR10G4Q8NGN3 311 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 OR10G9Q8NGN4 311 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 OR10G7Q8NGN6 311 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 TMEM18Q96B42 140 aa16.61■□□□□ 0.25
SMPD3-201ENST00000219334 GATCO43716 136 aaKnown RBP16.6■□□□□ 0.25
SMPD3-201ENST00000219334 MIDNQ504T8 468 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms