RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 EDN3P14138 238 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 ZFP36L1Q07352 338 aaKnown RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 EIF2S3LQ2VIR3 472 aaKnown RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 PMS2CLQ68D20 193 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 CALHM1Q8IU99 346 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 FGFBP3Q8TAT2 258 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 CFAP54Q96N23 3096 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 DUXBA0A1W2PPF3 345 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 NKX2-6A6NCS4 301 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 S100A6P06703 90 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 CCL4P13236 92 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 GNRHRP30968 328 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 NKX2-1P43699 371 aaPredicted RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 RAB1AP62820 205 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 TMEM182Q6ZP80 229 aaPredicted RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 SLC25A26Q70HW3 274 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 FAM213BQ8TBF2 198 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 IP6K3Q96PC2 410 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 P4HTMQ9NXG6 502 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
SRP54-201ENST00000216774 SIT1Q9Y3P8 196 aa11.47□□□□□ -0.57
SRP54-201ENST00000216774 ARID1AO14497 2285 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 CYTIPO60759 359 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 TK1P04183 234 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 ACAA1P09110 424 aaPredicted RBP11.46□□□□□ -0.57
SRP54-201ENST00000216774 RAB5AP20339 215 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 CLDN15P56746 228 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 FOXO1Q12778 655 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 PDCD1Q15116 288 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 TSC22D1Q15714 1073 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 COLCA1Q6ZS62 124 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 SAXO1Q8IYX7 474 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 EXTL1Q92935 676 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 TMEM45BQ96B21 275 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 MALSU1Q96EH3 234 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 PAPOLGQ9BWT3 736 aaKnown RBP11.46□□□□□ -0.57
SRP54-201ENST00000216774 SLC25A31Q9H0C2 315 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 PLEKHF2Q9H8W4 249 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 SLC7A10Q9NS82 523 aa11.46□□□□□ -0.57
SRP54-201ENST00000216774 LYRM2Q9NU23 88 aaPredicted RBP11.46□□□□□ -0.57
SRP54-201ENST00000216774 UBE2J1Q9Y385 318 aaPredicted RBP11.46□□□□□ -0.57
SRP54-201ENST00000216774 CCDC163A0A0D9SF12 145 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 CLEC18AA5D8T8 446 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 BTBD17A6NE02 478 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 CLINT1Q14677 625 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 TBC1D26Q86UD7 250 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 ZNF695Q8IW36 515 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 CLEC18CQ8NCF0 446 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 CPNE4Q96A23 557 aaPredicted RBP11.46□□□□□ -0.58
SRP54-201ENST00000216774 METTL1Q9UBP6 276 aaKnown RBP11.46□□□□□ -0.58
SRP54-201ENST00000216774 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.58
SRP54-201ENST00000216774 A0A1W2PPH5 198 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 A6NLC8 198 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 ZNF587BE7ETH6 402 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 NAPSAO96009 420 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 RFPL3SP0C7P2 107 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 MMP9P14780 707 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
SRP54-201ENST00000216774 NPBWR2P48146 333 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 SULT1A1P50225 295 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 ZNF565Q8N9K5 539 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 CD300LFQ8TDQ1 290 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 Q9N2K0 584 aa11.45□□□□□ -0.58
SRP54-201ENST00000216774 IGSF23A1L1A6 192 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 HSPA12AO43301 675 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 HOXA6P31267 233 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 MAS1LP35410 378 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 DUSP3P51452 185 aaPredicted RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 KRBOX4Q5JUW0 171 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 SELENOHQ8IZQ5 122 aaKnown RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 CPEB3Q8NE35 698 aaKnown RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 OR2G3Q8NGZ4 309 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 UNKLQ9H9P5 680 aaKnown RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 PI4KAP42356 2102 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 ZNF14P17017 642 aaPredicted RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 ATP6V0CP27449 155 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 NOVA1P51513 510 aaKnown RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 FGF12P61328 243 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-201ENST00000216774 BAXQ07812 192 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 SOHLH1Q5JUK2 328 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 SPIN3Q5JUX0 258 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 SUMF2Q8NBJ7 301 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 C20orf24Q9BUV8 137 aa11.44□□□□□ -0.58
SRP54-201ENST00000216774 REPIN1Q9BWE0 567 aaKnown RBP11.44□□□□□ -0.58
SRP54-201ENST00000216774 KIR2DS1A0A191URI9 304 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 SSSCA1O60232 199 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 TUSC2O75896 110 aa11.43□□□□□ -0.58
SRP54-201ENST00000216774 CFIP05156 583 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms