RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rad1Q9QWZ1 280 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 StrcQ8VIM6 1809 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cd101A8E0Y8 1033 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 C2cd6E9Q152 557 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pwwp2bE9Q9M8 600 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fcn2O70497 314 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 AanatO88816 205 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ndufb6Q3UIU2 128 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 DdiasQ6NZG4 898 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr479Q7TRV1 327 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dtx3Q80V91 347 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Arf2Q8BSL7 181 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r89Q8R256 316 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1424Q8VFV1 313 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr472Q8VG43 310 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mrpl41Q9CQN7 135 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Supt7lQ9CZV5 412 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r44Q9EQ47 310 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm10799F7C7U2 104 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Slc10a1O08705 362 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dhrs3O88876 302 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Csf3P09920 208 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 BlkP16277 499 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ppp1caP62137 330 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Foxb1Q64732 325 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr410Q8VFX7 315 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr402Q8VFX8 315 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1201Q8VGF5 307 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ptp4a3Q9D658 173 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cldn13Q9Z0S4 211 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zfp160E9Q459 650 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fli1P26323 452 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rab18P35293 206 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Atp4bP50992 294 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ccr2P51683 373 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Atf1P81269 269 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 McptlQ00356 246 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1222Q7TR02 311 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr923Q7TRB9 317 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 LipkQ8BM14 398 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Q8BTG6 205 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 ApehQ8R146 732 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr24Q8VFM9 313 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r51Q8VIC6 319 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gpx4Q91XR9 253 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Eif3iQ9QZD9 325 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rgs11Q9Z2H1 443 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ube2dnl1A2AFH1 155 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm6665F6Y363 85 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gdf1P20863 357 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rps10P63325 165 aaKnown RBP9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rbp2Q08652 134 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tmem211Q3UUA0 195 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr324Q5NCC7 333 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pptc7Q6NVE9 310 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tctn1Q8BZ64 593 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mrps18cQ8R2L5 143 aaKnown RBP9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Taf9Q8VI33 264 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ap1s2Q9DB50 160 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lrrc3cA0A1B0GRI5 255 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm36864A0A1Y7VJE6 447 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zfp688E9Q5M9 274 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dusp1P28563 367 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Slc6a9P28571 692 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 PkiaP63248 76 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 DhhQ61488 396 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 SheQ8BSD5 492 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr720Q8VF37 316 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr860Q8VFF7 317 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr828Q8VFM8 312 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr497Q8VG08 314 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pcdhga3Q91XY5 928 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Asb10Q91ZT7 467 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Il18bpQ9Z0M9 193 aa9.21□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 P01637 128 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Fgf2P15655 154 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Csf2rbP26955 896 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Rac1P63001 192 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr1229Q7TQZ9 311 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Zfp955aQ80XR7 545 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm11541Q8C4D8 108 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 YbeyQ8CAV0 164 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Scmh1Q8K214 706 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr57Q8VGU7 319 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Syt17Q920M7 470 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Srxn1Q9D975 136 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gm14444A2ARW3 426 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Olfr231E9Q0M4 307 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Zfp961E9Q4R5 444 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Casp16-psI6L890 176 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Grcc10O35127 126 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Lin7cO88952 197 aaKnown RBP9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Prkar2aP12367 401 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Klk1b26P36369 261 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Tas2r41P59532 308 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Snai2P97469 269 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 EndouQ3V188 412 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 Gtdc1Q8BW56 445 aa9.21□□□□□ -0.94
Ccdc40-201ENSMUST00000035935 GmdsQ8K0C9 372 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms