RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Mllt1Q9ERL0 547 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ctxnd2A0A1B0GQX3 59 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Smpd5D6MZJ6 483 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Lsm2O35900 95 aaKnown RBP9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Dnase1P49183 284 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 March9Q3TZ87 348 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Adam12Q61824 903 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ablim2Q8BL65 612 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 ManbalQ9D8X0 85 aa9.16□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Slc35d1A2AKQ0 355 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 4930444P10RikD3YUR1 185 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm16519F8VQK7 162 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Nipsnap1O55125 284 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 TcapO70548 167 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rab35Q6PHN9 201 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr479Q7TRV1 327 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Mettl27Q8BGM4 238 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1495Q8VEZ4 319 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr736Q8VFT6 312 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rab40cQ8VHQ4 281 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 MrgprdQ91ZB8 321 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ddb2Q99J79 432 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Dram2Q9CR48 267 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr878Q9EQA9 314 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ighv15-2A0A0A6YX72 118 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm11168J3QN50 228 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ppt2O35448 302 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Scd2P13011 358 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Slc6a9P28571 692 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Agfg2Q80WC7 479 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Cacfd1Q8BG21 171 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Oraov1Q8CH62 137 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Klf11Q8K1S5 502 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Plet1Q8VEN2 237 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr341Q8VGK9 313 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr378Q8VGT2 314 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Plekha3Q9ERS4 297 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Eif3gQ9Z1D1 320 aaKnown RBP9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Mrgpra9A0A140T8U8 332 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm6904E9PVF1 202 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Vmn1r174E9PYW5 313 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Vmn1r173E9Q8V7 313 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rnf148G3X9R7 316 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Adh1P00329 375 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 FblP35550 327 aaKnown RBP9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Slc45a2P58355 530 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Clec2fQ8VI21 196 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Xrcc2Q9CX47 278 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Slc50a1Q9CXK4 221 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 B3GNT2Q9Z222 397 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gcm2O09102 504 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Fut9O88819 359 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Zfp799Q8BHK4 648 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1459Q8VFV9 307 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Slc25a2Q99ML6 265 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rad1Q9QWZ1 280 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm15013V9GWY0 266 aa9.15□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1438-ps1A0A140LHS9 319 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Zdhhc22A0PK84 263 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Gm14325A2AW67 498 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr62L7MU75 315 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Pias3O54714 628 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Mansc4Q3UU94 337 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Morn4Q6PGF2 146 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Cdhr3Q8BL00 831 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Fam124bQ8BLQ0 456 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Neil3Q8K203 606 aaKnown RBP9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Cd209aQ91ZX1 238 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Ccdc198Q9CPZ1 294 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 PrnA0A075B668 197 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Mettl23A2AA28 253 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Sub1P11031 127 aaKnown RBP9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Dtx4Q6PDK8 616 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Map6Q7TSJ2 906 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Mettl20Q80ZM3 255 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr129Q8VEY1 330 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr95Q8VFE2 312 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr980Q8VH08 310 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Bbc3Q99ML1 193 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Slc19a3Q99PL8 488 aa9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 CsQ9CZU6 464 aaKnown RBP9.15□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Lrp5Q91VN0 1614 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Igkv10-96A0A140T8M1 115 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Zfp930A0A1D5RM15 441 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 BC048679D3YXE9 172 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr324Q5NCC7 333 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Lrrtm3Q8BZ81 582 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Pla2g16Q8R3U1 162 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr1240Q8VG73 314 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Lamp5Q9D387 280 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Iqcf5Q9DAL7 148 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Wdr4Q9EP82 413 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Tmem229aB9EJI9 371 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Gm2663F6R7E8 247 aaKnown RBP9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Cd40P27512 289 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Adipor2Q8BQS5 386 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Tssk5Q8C1R0 372 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 1810009J06RikQ9CPN7 247 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Mtfp1Q9CRB8 166 aa9.14□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Arl3Q9WUL7 182 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms