RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 A0A075B6Q4 140 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM14DPA8MWL7 114 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 HSPB6O14558 160 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 GEMIN2O14893 280 aaKnown RBP10.86□□□□□ -0.67
PHGDH-218ENST00000641491 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 PSG2P11465 335 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 GIFP27352 417 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 BLVRBP30043 206 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-218ENST00000641491 NR4A2P43354 598 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 ERVK11-1P61568 191 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 GNB2P62879 340 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 COL10A1Q03692 680 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 ZNF146Q15072 292 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 CNPY1Q3B7I2 92 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 NHLRC3Q5JS37 347 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM69Q5SWH9 247 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 BAIAP2L2Q6UXY1 529 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 NR2C2APQ86WQ0 139 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 LRRC28Q86X40 367 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM104Q8NE00 496 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 OR5D13Q8NGL4 314 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 C10orf105Q8TEF2 133 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 ST8SIA4Q92187 359 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 SLC25A28Q96A46 364 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 RAB3CQ96E17 227 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 NEIL1Q96FI4 390 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-218ENST00000641491 Q96M66 194 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 CCL13Q99616 98 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 FOXC2Q99958 501 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 KCNK15Q9H427 330 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 DCAF16Q9NXF7 216 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 FBLN5Q9UBX5 448 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 CLN8Q9UBY8 286 aa10.86□□□□□ -0.67
PHGDH-218ENST00000641491 A0A0A6YYH2 397 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 A0A1W2PP11 408 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 A0A1W2PPH5 198 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 A6NJ64 397 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 CEACAM18A8MTB9 384 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 H7C1Q1 480 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 HPGDSO60760 199 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 PDCD6O75340 191 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 FSTL3O95633 263 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 OR2H2O95918 312 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 APOA1P02647 267 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 FUT3P21217 361 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 KCNJ3P48549 501 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 NPY4RP50391 375 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 GRK1Q15835 563 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 SPANXN2Q5MJ10 180 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 STUMQ69YW2 141 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 Q6ZTK2 550 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 TGIF2LYQ8IUE0 185 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 H1FXQ92522 213 aaKnown RBP10.85□□□□□ -0.67
PHGDH-218ENST00000641491 DIRAS2Q96HU8 199 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 Q96MF0 132 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM246Q9BRR3 403 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 DPCDQ9BVM2 203 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-218ENST00000641491 BARHL1Q9BZE3 327 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 PTTG2Q9NZH5 202 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 RABL2AQ9UBK7 228 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-218ENST00000641491 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-218ENST00000641491 RABL2BQ9UNT1 228 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 A3GALT2U3KPV4 340 aa10.85□□□□□ -0.67
PHGDH-218ENST00000641491 RAI1Q7Z5J4 1906 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-218ENST00000641491 TACC2O95359 2948 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 F8VVB4 439 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 F8VWA3 439 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 CD3GP09693 182 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 CD37P11049 281 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 HOXB4P17483 251 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-218ENST00000641491 USF1P22415 310 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-218ENST00000641491 CEBPDP49716 269 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-218ENST00000641491 EDDM3BP56851 147 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 GNG2P59768 71 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 PITPNAQ00169 270 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 UNC119Q13432 240 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 ARFRP1Q13795 201 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 FOXB2Q5VYV0 432 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 CD276Q5ZPR3 534 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 TRAPPC6BQ86SZ2 158 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 LYPD6Q86Y78 171 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 OR10R2Q8NGX6 335 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 ANGPTL6Q8NI99 470 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 SEH1LQ96EE3 360 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 SNX22Q96L94 193 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 TM2D1Q9BX74 207 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 FAM234AQ9H0X4 552 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM165Q9HC07 324 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 RAB9BQ9NP90 201 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 ING3Q9NXR8 418 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 ETAA1Q9NY74 926 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 EXTL2Q9UBQ6 330 aa10.84□□□□□ -0.67
PHGDH-218ENST00000641491 MRPS7Q9Y2R9 242 aaKnown RBP10.84□□□□□ -0.67
PHGDH-218ENST00000641491 IGHV4-30-2A0A087WSY4 118 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 A0A1W2PQ09 198 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 GPR37O15354 613 aa10.83□□□□□ -0.68
PHGDH-218ENST00000641491 SIGLEC5O15389 551 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms