RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ALKBH6Q3KRA9 238 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 C4orf46Q504U0 113 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 Q8IYB0 196 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 SPICQ8N5J4 248 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 CYYR1Q96J86 154 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 RADILQ96JH8 1075 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 ZNF581Q9P0T4 197 aa14.02□□□□□ -0.16
PHGDH-216ENST00000641375 TSPAN4O14817 238 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 CXCL3P19876 107 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 FAM27E3Q08E93 113 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 TEX261Q6UWH6 196 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 TMED4Q7Z7H5 227 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 ZNF442Q9H7R0 627 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 SH3BGRL2Q9UJC5 107 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 U3KQ87 197 aa14.02□□□□□ -0.17
PHGDH-216ENST00000641375 MEIKINA0A087WXM9 373 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 C1QTNF9BB2RNN3 333 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 F8VVB4 439 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 F8VWA3 439 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 TIMM8AO60220 97 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-216ENST00000641375 OR4E1P0C645 316 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 C1QTNF9P0C862 333 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 AANATQ16613 207 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 SEZ6L2Q6UXD5 910 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 OVCH2Q7RTZ1 564 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 BATF2Q8N1L9 274 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 LINC00469Q8N7U9 141 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 SCGB3A2Q96PL1 93 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 HDHD3Q9BSH5 251 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-216ENST00000641375 SPACA1Q9HBV2 294 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 ANXA10Q9UJ72 324 aa14.01□□□□□ -0.17
PHGDH-216ENST00000641375 OR2AT4A6NND4 320 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 FCGR3AP08637 254 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 FABP6P51161 128 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 IL13RA2Q14627 380 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 DAZAP2Q15038 168 aaPredicted RBP14□□□□□ -0.17
PHGDH-216ENST00000641375 GRK1Q15835 563 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 TMEM211Q6ICI0 200 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 RGS7BPQ6MZT1 257 aaPredicted RBP14□□□□□ -0.17
PHGDH-216ENST00000641375 SSX8Q7RTT4 187 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 FAM58AQ8N1B3 248 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 SCCPDHQ8NBX0 429 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 ZNF680Q8NEM1 530 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 OR52B4Q8NGK2 314 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 MAFIPQ8WZ33 124 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 MRGPRFQ96AM1 343 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 EHFQ9NZC4 300 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 COQ3Q9NZJ6 369 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 RCC2Q9P258 522 aaKnown RBP14□□□□□ -0.17
PHGDH-216ENST00000641375 VSIG4Q9Y279 399 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 CEACAM18A8MTB9 384 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 ALKBH2Q6NS38 261 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 FAHD2BQ6P2I3 314 aaPredicted RBP14□□□□□ -0.17
PHGDH-216ENST00000641375 COMMD7Q86VX2 200 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 ZNF431Q8TF32 576 aaPredicted RBP14□□□□□ -0.17
PHGDH-216ENST00000641375 FAHD2AQ96GK7 314 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 VKORC1Q9BQB6 163 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 ZNF436Q9C0F3 470 aaPredicted RBP14□□□□□ -0.17
PHGDH-216ENST00000641375 IFT22Q9H7X7 185 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 JKAMPQ9P055 326 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 NPTNQ9Y639 398 aa14□□□□□ -0.17
PHGDH-216ENST00000641375 C16orf97H3BN30 126 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 CASP6P55212 293 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 ZNF154Q13106 437 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 PDCD1Q15116 288 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 CLLU1Q5K131 121 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 BRICD5Q6PL45 260 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 UNQ6494/PRO21346Q6UXR6 183 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 WDR86Q86TI4 376 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 SLC25A42Q86VD7 318 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 OR8H3Q8N146 312 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 MUC20Q8N307 709 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-216ENST00000641375 OR13G1Q8NGZ3 307 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 RND1Q92730 232 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 RANBP3Q9H6Z4 567 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-216ENST00000641375 MGAT4CQ9UBM8 478 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 FABP7O15540 132 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 RHBDL1O75783 438 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 MZT1Q08AG7 82 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 LHFPL1Q86WI0 220 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 CXXC4Q9H2H0 198 aa13.99□□□□□ -0.17
PHGDH-216ENST00000641375 MCRIP1C9JLW8 97 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 MLNRO43193 412 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 ACAA1P09110 424 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-216ENST00000641375 GLRXP35754 106 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 ECI1P42126 302 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 TAS2R31P59538 309 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 RELL2Q8NC24 303 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-216ENST00000641375 MARCH1Q8TCQ1 289 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 ZCCHC14Q8WYQ9 949 aaKnown RBP13.98□□□□□ -0.17
PHGDH-216ENST00000641375 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 ZNF286AQ9HBT8 521 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 IGKV1D-8A0A087WSZ0 117 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 H0YL77 283 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 SDCBPO00560 298 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-216ENST00000641375 CDIPTO14735 213 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 GLAP06280 429 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 FPR2P25090 351 aa13.98□□□□□ -0.17
PHGDH-216ENST00000641375 RPS23P62266 143 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms