RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RAC3P60763 192 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 UBE2V2Q15819 145 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 OR2V2Q96R30 315 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 ARHGAP21Q5T5U3 1957 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 CUL9Q8IWT3 2517 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 HBZP02008 142 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 NPBWR2P48146 333 aa17.34■□□□□ 0.37
CACNA1A-257ENST00000638009 PPP1R17O96001 155 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 GPR3P46089 330 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 PPIAP62937 165 aaKnown RBP17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 COX20Q5RI15 118 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 SLC25A30Q5SVS4 291 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 SLCO1C1Q9NYB5 712 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 RBBP6Q7Z6E9 1792 aaKnown RBP17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 NDUFB6O95139 128 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 TM4SF18Q96CE8 201 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 HCFC1P51610 2035 aa17.33■□□□□ 0.37
CACNA1A-257ENST00000638009 PYCARD-AS1I3L0S3 204 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 CTU1Q7Z7A3 348 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 Q8WTZ3 238 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 SEZ6L2Q6UXD5 910 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 WFDC8Q8IUA0 241 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 AQP10Q96PS8 301 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 CYSLTR2Q9NS75 346 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 ADAMTS17Q8TE56 1095 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 VSIG4Q9Y279 399 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 SPG11Q96JI7 2443 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 HAPLN2Q9GZV7 340 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 CCR5P51681 352 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 LIM2P55344 173 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 SLC35B1P78383 322 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 RNF165Q6ZSG1 346 aa17.33■□□□□ 0.36
CACNA1A-257ENST00000638009 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 MPC2O95563 127 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 SSX8Q7RTT4 187 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 C10orf128Q5T292 105 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 TEX29Q8N6K0 151 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 C16orf70Q9BSU1 422 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 DCTDP32321 178 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 SERF2P84101 59 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 OR2Z1Q8NG97 314 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 TXNDC17Q9BRA2 123 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 KMT5CQ86Y97 462 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 WDFY1Q8IWB7 410 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 TMEM140Q9NV12 185 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 SORL1Q92673 2214 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 TMEM101Q96IK0 257 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF107Q9UII5 783 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 RPL18Q07020 188 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 LMO3Q8TAP4 145 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 C2orf88Q9BSF0 95 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 CLEC1BQ9P126 229 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 C3orf85A0A1B0GTC6 90 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 B4E171 279 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 ARF6P62330 175 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 C20orf27Q9GZN8 174 aa17.32■□□□□ 0.36
CACNA1A-257ENST00000638009 ABHD17CQ6PCB6 329 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 ALKBH7Q9BT30 221 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 PEF1Q9UBV8 284 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF749O43361 778 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 ATF1P18846 271 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 MKRN2OSH3BPM6 223 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 ISL1P61371 349 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 OR1F12Q8NHA8 337 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 KLF3P57682 345 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 LYG1Q8N1E2 194 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 STPG3Q8N7X2 389 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 OR4C45A6NMZ5 311 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 ID4P47928 161 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 SLC37A1P57057 533 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 TGIF2-C20orf24A0A0A6YYL0 155 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 SERTM1A2A2V5 107 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 HLA-DQA1P01909 254 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 SURF2Q15527 256 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 SPATA45Q537H7 98 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 DOK1Q99704 481 aa17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 GEMIN7Q9H840 131 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-257ENST00000638009 RAB29O14966 203 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 ASTLQ6HA08 431 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 OR8B3Q8NGG8 313 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 OR8D4Q8NGM9 314 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 RBPJLQ9UBG7 517 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 NDUFS8O00217 210 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 FAM157BP0CG42 384 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 PLPPR5Q32ZL2 321 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 TMEM189-UBE2V1I3L0A0 370 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 SLC17A3O00476 420 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF789Q5FWF6 425 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 WDTC1Q8N5D0 677 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 PPIL1Q9Y3C6 166 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF236Q9UL36 1845 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 C9orf170A2RU37 121 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 SNURFLB1AK76 121 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 TNFSF11O14788 317 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 TIMP1P01033 207 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 FABP5Q01469 135 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms