RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ELF5Q9UKW6 265 aaPredicted RBP12.98□□□□□ -0.33
CLN6-219ENST00000637329 EDARQ9UNE0 448 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 CENPEQ02224 2701 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ADGRG4Q8IZF6 3080 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ESPL1Q14674 2120 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 PRR14LQ5THK1 2151 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 A0A1B0GVG6 124 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 POM121CA8CG34 1229 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 C17orf100A8MU93 164 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 MT-ND4P03905 459 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 SPNP16150 400 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 PLA1AQ53H76 456 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 STEAP1BQ6NZ63 245 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 RTN4RL2Q86UN3 420 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 OR4C16Q8NGL9 310 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 Q8TCH9 128 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 CREB3L1Q96BA8 519 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 PIK3IP1Q96FE7 263 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 SULT4A1Q9BR01 284 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 SEBOXQ9HB31 216 aaPredicted RBP12.97□□□□□ -0.33
CLN6-219ENST00000637329 C1orf123Q9NWV4 160 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 IL36RNQ9UBH0 155 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 GLS2Q9UI32 602 aa12.97□□□□□ -0.33
CLN6-219ENST00000637329 HIVEP3Q5T1R4 2406 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 hCG_1807616A0A1W2PRN6 198 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 SPRY3O43610 288 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 KNG1P01042 644 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 CD3DP04234 171 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 TNFRSF1AP19438 455 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 MDH2P40926 338 aaKnown RBP12.96□□□□□ -0.33
CLN6-219ENST00000637329 TAS2R46P59540 309 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 SNTB1Q13884 538 aaKnown RBP12.96□□□□□ -0.33
CLN6-219ENST00000637329 RBM39Q14498 530 aaKnown RBP12.96□□□□□ -0.33
CLN6-219ENST00000637329 MPPED2Q15777 294 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 SHEQ5VZ18 495 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 HOGA1Q86XE5 327 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 ITLN1Q8WWA0 313 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 HPS1Q92902 700 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 CMSS1Q9BQ75 279 aaKnown RBP12.96□□□□□ -0.33
CLN6-219ENST00000637329 MS4A5Q9H3V2 200 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 UFSP2Q9NUQ7 469 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 FAIMQ9NVQ4 179 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 AK3Q9UIJ7 227 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 NUBP2Q9Y5Y2 271 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 NPTNQ9Y639 398 aa12.96□□□□□ -0.33
CLN6-219ENST00000637329 LRBAP50851 2863 aa12.96□□□□□ -0.34
CLN6-219ENST00000637329 PCNX1Q96RV3 2341 aa12.96□□□□□ -0.34
CLN6-219ENST00000637329 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
CLN6-219ENST00000637329 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 MCRIP1C9JLW8 97 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 SH2D1BO14796 132 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 RAB3DO95716 219 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 FCGR3AP08637 254 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 GLRA1P23415 457 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 SRSF7Q16629 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLN6-219ENST00000637329 RNASE10Q5GAN6 216 aaKnown RBP12.95□□□□□ -0.34
CLN6-219ENST00000637329 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 ACP7Q6ZNF0 438 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 BATF2Q8N1L9 274 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 LRRC29Q8WV35 223 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 SNAPC3Q92966 411 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 FBXW5Q969U6 566 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 HS3ST6Q96QI5 342 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 MARVELD1Q9BSK0 173 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 FAAP24Q9BTP7 215 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 CACNG6Q9BXT2 260 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 RIMS4Q9H426 269 aaPredicted RBP12.95□□□□□ -0.34
CLN6-219ENST00000637329 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 SLC2A8Q9NY64 477 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
CLN6-219ENST00000637329 TREM2Q9NZC2 230 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 NLKQ9UBE8 527 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 CELSR2Q9HCU4 2923 aa12.95□□□□□ -0.34
CLN6-219ENST00000637329 IFNL4K9M1U5 179 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 GIFP27352 417 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 SNU13P55769 128 aaKnown RBP12.94□□□□□ -0.34
CLN6-219ENST00000637329 RAG2P55895 527 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 SNRPD2P62316 118 aaKnown RBP12.94□□□□□ -0.34
CLN6-219ENST00000637329 VAX1Q5SQQ9 334 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 Q6P435 159 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 ZNF826PQ6ZT77 177 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 BTN2A1Q7KYR7 527 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 MOGAT3Q86VF5 341 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 BEST4Q8NFU0 473 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 OR11L1Q8NGX0 322 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
CLN6-219ENST00000637329 UPRTQ96BW1 309 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
CLN6-219ENST00000637329 MCUBQ9NWR8 336 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 ZNF581Q9P0T4 197 aa12.94□□□□□ -0.34
CLN6-219ENST00000637329 KLF2Q9Y5W3 355 aaPredicted RBP12.94□□□□□ -0.34
CLN6-219ENST00000637329 TRAV24A0A0B4J272 114 aa12.93□□□□□ -0.34
CLN6-219ENST00000637329 IGHV3-64DA0A0J9YX35 117 aa12.93□□□□□ -0.34
CLN6-219ENST00000637329 DISC1C4P0D8 188 aa12.93□□□□□ -0.34
CLN6-219ENST00000637329 H7C1Q1 480 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms