RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 EPHA1P21709 976 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 GABRA5P31644 462 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 OR3A4PP47883 348 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 FGF12P61328 243 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 COL10A1Q03692 680 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 EMX1Q04741 257 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 METTL11BQ5VVY1 283 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 ZNF773Q6PK81 442 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 ASCL4Q6XD76 172 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 ASCC1Q8N9N2 400 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 PHYHIPQ92561 330 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 SIRPDQ9H106 197 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 EXOSC4Q9NPD3 245 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 LRRC42Q9Y546 428 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 KPTNQ9Y664 436 aa13.34□□□□□ -0.27
CACNA1A-229ENST00000636670 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 K7N7A8 449 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 TK1P04183 234 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 UCHL1P09936 223 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 MMP9P14780 707 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 PTGFRP43088 359 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 INSL4Q14641 139 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 CMTM4Q8IZR5 234 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 SPARTQ8N0X7 666 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 OR8H2Q8N162 312 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 Q8NFD4 153 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 NDUFB11Q9NX14 153 aa13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 SF3B6Q9Y3B4 125 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-229ENST00000636670 A0A1W2PPK0 400 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 A0A1W2PQ09 198 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 MEGF11A6BM72 1044 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 SNU13P55769 128 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 IL13RA2Q14627 380 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 RSU1Q15404 277 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 HSD17B12Q53GQ0 312 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 KLF17Q5JT82 389 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 FAM27D1Q5T7N8 215 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 JAGN1Q8N5M9 183 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 CHST4Q8NCG5 386 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 OR51T1Q8NGJ9 327 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 PPP1R35Q8TAP8 253 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 SNX22Q96L94 193 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 WDFY2Q96P53 400 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 S100A13Q99584 98 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 CNTD2Q9H8S5 307 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 TCF7L1Q9HCS4 588 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 NUP50Q9UKX7 468 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
CACNA1A-229ENST00000636670 M0R1W7 72 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 ZNF780AO75290 641 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 ARL6IP5O75915 188 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 TOX4O94842 621 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 MAS1P04201 325 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 HKR1P10072 659 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 PDCD1Q15116 288 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 SSX1Q16384 188 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 FBLN7Q53RD9 439 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 NHLRC3Q5JS37 347 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 CEACAM19Q7Z692 300 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 LYPD6Q86Y78 171 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 OR5D13Q8NGL4 314 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 TBC1D15Q8TC07 691 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 TBX15Q96SF7 602 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 NKX3-1Q99801 234 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 UQCC2Q9BRT2 126 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 SLITRK2Q9H156 845 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 METTL9Q9H1A3 318 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 ONECUT1Q9UBC0 465 aa13.31□□□□□ -0.28
CACNA1A-229ENST00000636670 A0A1W2PPH5 198 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 TMEM82A0PJX8 343 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 SH2D1BO14796 132 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 OR2H2O95918 312 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 CSN2P05814 226 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 LMO1P25800 156 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 DUSP1P28562 367 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 GP2P55259 537 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 RPL31P62899 125 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 GPR176Q14439 515 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 TMEM91Q6ZNR0 172 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 C17orf107Q6ZR85 190 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 GDPD3Q7L5L3 318 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 LINC00596Q86U02 117 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 FAM185AQ8N0U4 392 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 TMEM203Q969S6 136 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 MUL1Q969V5 352 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 SUCNR1Q9BXA5 334 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 PCDHB16Q9NRJ7 776 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 C19orf12Q9NSK7 152 aa13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 MRPS28Q9Y2Q9 187 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-229ENST00000636670 SIRPB1O00241 398 aa13.29□□□□□ -0.28
CACNA1A-229ENST00000636670 CCRL2O00421 344 aa13.29□□□□□ -0.28
CACNA1A-229ENST00000636670 MGST3O14880 152 aa13.29□□□□□ -0.28
CACNA1A-229ENST00000636670 PSPNO60542 156 aa13.29□□□□□ -0.28
CACNA1A-229ENST00000636670 CDRT1O95170 752 aa13.29□□□□□ -0.28
CACNA1A-229ENST00000636670 TNFAIP8O95379 198 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms