RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 STX12Q86Y82 276 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 MPPED1O15442 326 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 TRGC2P03986 189 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 OPN1LWP04000 364 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 GLI4P10075 376 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 ZNF124Q15973 351 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 OR2T2Q6IF00 324 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 MEX3BQ6ZN04 569 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 SHISA6Q6ZSJ9 500 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 ZNF100Q8IYN0 542 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 C1orf87Q8N0U7 546 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 ABHD14AQ9BUJ0 271 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
CACNA1A-220ENST00000635988 SEC16AO15027 2179 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 ANGPTL7O43827 346 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 SOD3P08294 240 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 SHBQ15464 509 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 ANKRD37Q7Z713 158 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 OR11L1Q8NGX0 322 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 CLDND2Q8NHS1 167 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 FAM210BQ96KR6 192 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 TP53RKQ96S44 253 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 SLC7A11Q9UPY5 501 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 HS3ST3B1Q9Y662 390 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 RSPO1Q2MKA7 263 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 LBHQ53QV2 105 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 CDPF1Q6NVV7 123 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 ZNF695Q8IW36 515 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 OR2M3Q8NG83 312 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 OR5C1Q8NGR4 320 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 CD207Q9UJ71 328 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
CACNA1A-220ENST00000635988 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 LMO7DNF2Z398 122 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 TERTO14746 1132 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 SPRY1O43609 319 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 ZNF205O95201 554 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 DDTP30046 118 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 PTGDSP41222 190 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM211Q6ICI0 200 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 OR10AD1Q8NGE0 317 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM171Q8WVE6 324 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 FAM86C1Q9NVL1 165 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 PLEK2Q9NYT0 353 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 FOXD3Q9UJU5 478 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 UBE2J1Q9Y385 318 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 TRGC1P0CF51 173 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 AADACP22760 399 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 OMGP23515 440 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 CD38P28907 300 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 RND2P52198 227 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 MALLQ13021 153 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 EXT1Q16394 746 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 DTX1Q86Y01 620 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 CMTM1Q8IZ96 169 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 OSR2Q8N2R0 312 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
CACNA1A-220ENST00000635988 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 PROB1E7EW31 1015 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 CLDN34H7C241 214 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 DUX1O43812 170 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 PPYP01298 95 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 OR1D5P58170 312 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 KMT5CQ86Y97 462 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 OR5R1Q8NH85 324 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 NABP1Q96AH0 204 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 RCC1LQ96I51 464 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 FGF21Q9NSA1 209 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 IL36GQ9NZH8 169 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 CLEC18AA5D8T8 446 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 SSSCA1O60232 199 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 PDCD6O75340 191 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 NOVA1P51513 510 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 DYNLT3P51808 116 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 HNRNPKP61978 463 aaKnown RBP eCLIP12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 HYAL1Q12794 435 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 GAMTQ14353 236 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 OR8G1Q15617 311 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 DPPA2Q7Z7J5 298 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 IL22RA1Q8N6P7 574 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 CLEC18CQ8NCF0 446 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 POM121Q96HA1 1249 aa12.83□□□□□ -0.36
CACNA1A-220ENST00000635988 RHOVQ96L33 236 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms