RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 SKA2Q8WVK7 121 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 GLMPQ8WWB7 406 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 DIO2Q92813 273 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 FGF13Q92913 245 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 NINJ1Q92982 152 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 DVL3Q92997 716 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 FAM46BQ96A09 425 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 MRPL24Q96A35 216 aaKnown RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 SARAFQ96BY9 339 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 PLD4Q96BZ4 506 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 GALMQ96C23 342 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 NEURL3Q96EH8 262 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 GNPNAT1Q96EK6 184 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 ZNF764Q96H86 408 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 WDYHV1Q96HA8 205 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 SMIM10Q96HG1 83 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 GMPPAQ96IJ6 420 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 KCNS1Q96KK3 526 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 FCRL2Q96LA5 508 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 UHRF2Q96PU4 802 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 FRG2BQ96QU4 278 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 GPA33Q99795 319 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 RARRES2Q99969 163 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 HSPB9Q9BQS6 159 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 RSG1Q9BU20 258 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 DUSP23Q9BVJ7 150 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 TPPP3Q9BW30 176 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 SAMD10Q9BYL1 202 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 GTSF1LQ9H1H1 148 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 RNF39Q9H2S5 420 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 LINC00597Q9H2U6 94 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 UBE2ZQ9H832 354 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 ZDHHC11Q9H8X9 412 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 WDR54Q9H977 334 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 PATZ1Q9HBE1 687 aaKnown RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 MANBALQ9NQG1 85 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 GPR84Q9NQS5 396 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 C1orf123Q9NWV4 160 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 KCNIP1Q9NZI2 227 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 TFCP2L1Q9NZI6 479 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 THYN1Q9P016 225 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 FRRS1LQ9P0K9 344 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 SS18L2Q9UHA2 77 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 ZNF391Q9UJN7 358 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 CCNL1Q9UK58 526 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 KLK13Q9UKR3 277 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 ERG28Q9UKR5 140 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 MCTS1Q9ULC4 181 aaKnown RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 MMP17Q9ULZ9 603 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 ANAPC10Q9UM13 185 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 HHLA2Q9UM44 414 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 ICAM5Q9UMF0 924 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 BOKQ9UMX3 212 aaPredicted RBP1.68□□□□□ -2.14
TCF4-264ENST00000628391 DAPP1Q9UN19 280 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 PSG8Q9UQ74 426 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 SLC17A4Q9Y2C5 497 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 NSG2Q9Y328 171 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 TMED7Q9Y3B3 224 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 PPIAL4AQ9Y536 164 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 TRAPPC1Q9Y5R8 145 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 B3GALT1Q9Y5Z6 326 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 HS3ST3A1Q9Y663 406 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 PXMP4Q9Y6I8 212 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 PLXNA2O75051 1894 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 TMEM131Q92545 1883 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 ANKRD12Q6UB98 2062 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 ANAPC1Q9H1A4 1944 aa1.68□□□□□ -2.14
TCF4-264ENST00000628391 CKAP5Q14008 2032 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 EVPLQ92817 2033 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 COL4A2P08572 1712 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TRAV9-2A0A087WT02 112 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.67□□□□□ -2.14
TCF4-264ENST00000628391 NSG1A0A0A6YYJ2 146 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TRBV9A0A0B4J1U6 114 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TRAV8-6A0A0B4J262 113 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TRAV25A0A0B4J276 109 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 A0A0J9YY10 115 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 CENPVL1A0A0U1RR11 272 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 SPAARA0A1B0GVQ0 90 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 A0A1B0GX78 115 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 A0A1W2PPK0 400 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TMEM213A2RRL7 107 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 LRP5LA4QPB2 252 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TMEM189A5PLL7 270 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 GAGE12HA6NDE8 117 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 GAGE10A6NGK3 116 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 FBLL1A6NHQ2 334 aaKnown RBP1.67□□□□□ -2.14
TCF4-264ENST00000628391 C19orf67A6NJJ6 358 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 OR2AG2A6NM03 316 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TMEM212A6NML5 194 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 ANKRD30BLA7E2S9 258 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 ZNF732B4DXR9 585 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TMEM250H0YL14 139 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.67□□□□□ -2.14
TCF4-264ENST00000628391 CLDN5O00501 218 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TNFRSF10CO14798 259 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 TNFRSF13BO14836 293 aaPredicted RBP1.67□□□□□ -2.14
TCF4-264ENST00000628391 SNAI2O43623 268 aa1.67□□□□□ -2.14
TCF4-264ENST00000628391 ZNF207O43670 478 aaKnown RBP1.67□□□□□ -2.14
TCF4-264ENST00000628391 LILRA1O75019 489 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms