RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ACOT13Q9NPJ3 140 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4Q9UBX2 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 IGKV1-12A0A0C4DH73 117 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 TRIM77I1YAP6 450 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 IGKV1D-12P01611 117 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 HSMCR30P0CW71 290 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 SELLP14151 372 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 GABRR1P24046 479 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 PRTN3P24158 256 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 LMO1P25800 156 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 GRK1Q15835 563 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 HSD17B12Q53GQ0 312 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 ASPHD2Q6ICH7 369 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 OR51T1Q8NGJ9 327 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 OR13C5Q8NGS8 318 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 TMED9Q9BVK6 235 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 SPACA1Q9HBV2 294 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 NOX4Q9NPH5 578 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 GSTK1Q9Y2Q3 226 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 LRRC42Q9Y546 428 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 ATRQ13535 2644 aa11.54□□□□□ -0.56
SNRPA1-216ENST00000626000 IGHV1-69DA0A0B4J2H0 117 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 F8VVB4 439 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 F8VWA3 439 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 DEGS1O15121 323 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 FCN3O75636 299 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 IGHV1-69P01742 117 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 SFTPBP07988 381 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 UBBP0CG47 229 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 GTF2F2P13984 249 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 ZNF44P15621 663 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 GALP22466 123 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 GABRA5P31644 462 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 PSMD7P51665 324 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 EDDM3BP56851 147 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 MPV17LQ2QL34 196 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 TUSC1Q2TAM9 212 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 LIPKQ5VXJ0 399 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 GLT8D1Q68CQ7 371 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 UNQ9370/PRO34162Q6UXP9 181 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 VMO1Q7Z5L0 202 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 JAGN1Q8N5M9 183 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 TBX15Q96SF7 602 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 HEXA-AS1Q9H8Q6 139 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 LINC00312Q9Y6C7 94 aa11.53□□□□□ -0.56
SNRPA1-216ENST00000626000 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
SNRPA1-216ENST00000626000 TRAV8-7A0A075B6U6 113 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 SC5DO75845 299 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 RGS9O75916 674 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 OR2H2O95918 312 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 UCHL1P09936 223 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 ERVFRD-1P60508 538 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 CRIP3Q6Q6R5 217 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 CEACAM19Q7Z692 300 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 OSR2Q8N2R0 312 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 SLC6A7Q99884 636 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 CST11Q9H112 138 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 IFT22Q9H7X7 185 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 ING4Q9UNL4 249 aa11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 MRPS28Q9Y2Q9 187 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 UBE2J1Q9Y385 318 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 SF3B6Q9Y3B4 125 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-216ENST00000626000 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 CLDN34H7C241 214 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 HTR3BO95264 441 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 ZNF728P0DKX0 622 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 SRMP19623 302 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 OR3A4PP47883 348 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 UBE2E1P51965 193 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 P2RX3P56373 397 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 PAX5Q02548 391 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 MIDNQ504T8 468 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 TMEM200BQ69YZ2 307 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 AWAT2Q6E213 333 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 C17orf107Q6ZR85 190 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 FGFRL1Q8N441 504 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 TMEM86BQ8N661 226 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 SGCDQ92629 289 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 LHX4Q969G2 390 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 ZNF714Q96N38 554 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 PRDM13Q9H4Q3 707 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 FAM96BQ9Y3D0 163 aa11.51□□□□□ -0.57
SNRPA1-216ENST00000626000 TMEM82A0PJX8 343 aa11.5□□□□□ -0.57
SNRPA1-216ENST00000626000 FAM90A10PA6NDY2 464 aa11.5□□□□□ -0.57
SNRPA1-216ENST00000626000 FAM90A18PA6NE21 464 aa11.5□□□□□ -0.57
SNRPA1-216ENST00000626000 FAM90A16PA6NEW6 464 aa11.5□□□□□ -0.57
SNRPA1-216ENST00000626000 FAM90A20PA6NIJ5 464 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms