RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ANKHD1Q8IWZ3 2542 aaKnown RBP1.29□□□□□ -2.2
VBP1-204ENST00000625964 ATAD5Q96QE3 1844 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 TANC1Q9C0D5 1861 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 ATG2AQ2TAZ0 1938 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 MCM3APO60318 1980 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 A0A0A6YYD5 115 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 TSPAN11A1L157 253 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 DNALI1O14645 258 aaPredicted RBP1.29□□□□□ -2.2
VBP1-204ENST00000625964 OR2F2O95006 317 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 FSTL3O95633 263 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 NRASP01111 189 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 HRASP01112 189 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 KRASP01116 189 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 TRBV12-3P01733 135 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 KRT14P02533 472 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 MMP7P09237 267 aaPredicted RBP1.29□□□□□ -2.2
VBP1-204ENST00000625964 SMIM10L2AP0DMW4 78 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 SMIM10L2BP0DMW5 78 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 CD52P31358 61 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 PPP1CAP62136 330 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 MGAT3Q09327 533 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 VKORC1L1Q8N0U8 176 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 PPTC7Q8NI37 304 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 FAM81AQ8TBF8 368 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 TMEM159Q96B96 161 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 S100PBPQ96BU1 408 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 ZNF707Q96C28 371 aaPredicted RBP1.29□□□□□ -2.2
VBP1-204ENST00000625964 C8orf44Q96CB5 159 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 PDCD1LG2Q9BQ51 273 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 EMC6Q9BV81 110 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 CALN1Q9BXU9 219 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 TRIM4Q9C037 500 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 DUSP21Q9H596 190 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 ZNF302Q9NR11 478 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 HPCAL4Q9UM19 191 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 RCL1Q9Y2P8 373 aaKnown RBP1.29□□□□□ -2.2
VBP1-204ENST00000625964 LRBAP50851 2863 aa1.29□□□□□ -2.2
VBP1-204ENST00000625964 MYO16Q9Y6X6 1858 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 SVILO95425 2214 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 HIVEP1P15822 2718 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 MGAQ8IWI9 3026 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 SYNJ2BP-COX16A0A087WUM0 186 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 E7EQL1 145 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 SIPA1L1O43166 1804 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 IGHV1-46P01743 117 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 GABRG2P18507 467 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 STOMP27105 288 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 HMOX2P30519 316 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 SERPINB8P50452 374 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 C21orf59P57076 290 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 KDSRQ06136 332 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 SLC9A3R2Q15599 337 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 TRMT5Q32P41 509 aaKnown RBP1.28□□□□□ -2.2
VBP1-204ENST00000625964 GREB1Q4ZG55 1949 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 ZNF678Q5SXM1 525 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 CCDC183Q5T5S1 534 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 AMMECR1LQ6DCA0 310 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 WDR59Q6PJI9 974 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 ZBED9Q6R2W3 1325 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 RP1L1Q8IWN7 2480 aaPredicted RBP1.28□□□□□ -2.2
VBP1-204ENST00000625964 JAGN1Q8N5M9 183 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 LRRC75AQ8NAA5 344 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 OR4C13Q8NGP0 309 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 OR5AR1Q8NGP9 310 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 DLG5Q8TDM6 1919 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 DNAJB3Q8WWF6 145 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 NRGNQ92686 78 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 FGF13Q92913 245 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 RAB1CQ92928 201 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 ATG2BQ96BY7 2078 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 GSDMAQ96QA5 445 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 TMEM185BQ9H7F4 350 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 RAB22AQ9UL26 194 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 MCTS1Q9ULC4 181 aaKnown RBP1.28□□□□□ -2.2
VBP1-204ENST00000625964 CAB39Q9Y376 341 aaPredicted RBP1.28□□□□□ -2.2
VBP1-204ENST00000625964 SLC22A7Q9Y694 548 aa1.28□□□□□ -2.2
VBP1-204ENST00000625964 NIPBLQ6KC79 2804 aaeCLIP1.28□□□□□ -2.21
VBP1-204ENST00000625964 ATRQ13535 2644 aa1.28□□□□□ -2.21
VBP1-204ENST00000625964 SPAG17Q6Q759 2223 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 MYH13Q9UKX3 1938 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 CELSR3Q9NYQ7 3312 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 UTP20O75691 2785 aaKnown RBP1.27□□□□□ -2.21
VBP1-204ENST00000625964 STAB1Q9NY15 2570 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 HLA-EP13747 358 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 RAB5AP20339 215 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 SNAP25P60880 206 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 UBE2MP61081 183 aaKnown RBP1.27□□□□□ -2.21
VBP1-204ENST00000625964 ZNF141Q15928 474 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 ZNF660Q6AZW8 331 aaPredicted RBP1.27□□□□□ -2.21
VBP1-204ENST00000625964 TWF2Q6IBS0 349 aaKnown RBP1.27□□□□□ -2.21
VBP1-204ENST00000625964 Q6ZS52 159 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 LY6G5BQ8NDX9 201 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 MSANTD3Q96H12 275 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 IGF2BP2-AS1Q96M15 143 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 OR2V2Q96R30 315 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 PANX1Q96RD7 426 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 KLF6Q99612 283 aaPredicted RBP1.27□□□□□ -2.21
VBP1-204ENST00000625964 GPR21Q99679 349 aa1.27□□□□□ -2.21
VBP1-204ENST00000625964 CCDC77Q9BR77 488 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms