RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 BLOC1S6Q9UL45 172 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ING4Q9UNL4 249 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 FAM96BQ9Y3D0 163 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 TMEM82A0PJX8 343 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF737O75373 536 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR2H2O95918 312 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 ALDOBP05062 364 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 CD1AP06126 327 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 CRHBPP24387 322 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 TGFBR2P37173 567 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR3A4PP47883 348 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 MTNR1BP49286 362 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 DLX1P56177 255 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 UBA52P62987 128 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 KLRD1Q13241 179 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 CRIP3Q6Q6R5 217 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 PXT1Q8NFP0 134 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 FAM216AQ8WUB2 273 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR5M11Q96RB7 305 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF184Q99676 751 aaPredicted RBP11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 TMED9Q9BVK6 235 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 DUSP21Q9H596 190 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 TNFRSF19Q9NS68 423 aa11.47□□□□□ -0.57
PCDHGC3-208ENST00000622836 MEX3AA1L020 520 aaKnown RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 RNASEK-C17orf49H0YIS7 233 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 MGST3O14880 152 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 DEGS1O15121 323 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 PSPNO60542 156 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 CDRT1O95170 752 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 HTR3BO95264 441 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 CSTBP04080 98 aaKnown RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 MAS1P04201 325 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 CCL3L1P16619 93 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 IGFBP3P17936 291 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 FSTP19883 344 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 PRTN3P24158 256 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 PTGFRP43088 359 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 ACSM1Q08AH1 577 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 DOC2BQ14184 412 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF273Q14593 569 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 RBM48Q5RL73 367 aaKnown RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 METAP1DQ6UB28 335 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 C17orf107Q6ZR85 190 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 JAGN1Q8N5M9 183 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 TPRX1Q8N7U7 411 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR4S1Q8NGB4 309 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR10K1Q8NGX5 313 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 UFD1Q92890 307 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 GCDHQ92947 438 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 SLC25A28Q96A46 364 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 DERL3Q96Q80 235 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 METTL9Q9H1A3 318 aa11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZMAT3Q9HA38 289 aaKnown RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 SEBOXQ9HB31 216 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.57
PCDHGC3-208ENST00000622836 STAB1Q9NY15 2570 aa11.46□□□□□ -0.58
PCDHGC3-208ENST00000622836 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 hADV38S2A0JD32 116 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 NPFFO15130 113 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 HOXA3O43365 443 aaPredicted RBP11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 PAHP00439 452 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 OR3A1P47881 315 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 MEF2CQ06413 473 aaPredicted RBP11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 IRF3Q14653 427 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 PRSS48Q7RTY5 328 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 CHST4Q8NCG5 386 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 ZNF714Q96N38 554 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 PPA2Q9H2U2 334 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 NOX4Q9NPH5 578 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 ING3Q9NXR8 418 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 FOXJ3Q9UPW0 622 aa11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 LSM2Q9Y333 95 aaKnown RBP11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 SF3B6Q9Y3B4 125 aaKnown RBP11.45□□□□□ -0.58
PCDHGC3-208ENST00000622836 MEIOCA2RUB1 952 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 FUOMA2VDF0 154 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 MAGEA13PA6NCF6 341 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 HSPB6O14558 160 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 GPX5O75715 221 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 ZNF728P0DKX0 622 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 SERPINA2P20848 420 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 COX7A1P24310 79 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 UBE2E1P51965 193 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 ERVFRD-1P60508 538 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 ACSM3Q53FZ2 586 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 LIPKQ5VXJ0 399 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 ELP2Q6IA86 826 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 Q6YL49 198 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 ZNF782Q6ZMW2 699 aaPredicted RBP11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 PNKDQ8N490 385 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 TNFRSF14Q92956 283 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 HEXA-AS1Q9H8Q6 139 aa11.44□□□□□ -0.58
PCDHGC3-208ENST00000622836 UNKLQ9H9P5 680 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms