RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 GPR87Q9BY21 358 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 PECRQ9BY49 303 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 IGHV1OR15-9A0A0B4J2B8 117 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-210ENST00000622533 A0A1B0GW64 132 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-210ENST00000622533 FAM221AA4D161 298 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 FOXI3A8MTJ6 420 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-210ENST00000622533 MMP7P09237 267 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-210ENST00000622533 OR5AC1P0C628 307 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 ZNF17P17021 662 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 ATP6V0CP27449 155 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 HOXA6P31267 233 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 CEACAM6P40199 344 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 NOVA1P51513 510 aaKnown RBP11.36□□□□□ -0.59
CHD1L-210ENST00000622533 SHHQ15465 462 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 KISS1Q15726 138 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 PLPPR5Q32ZL2 321 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 FAM57BQ71RH2 274 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 TSTD1Q8NFU3 115 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 OR13D1Q8NGV5 346 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 PP6455Q8WZ26 134 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 OXGR1Q96P68 337 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 PNRC2Q9NPJ4 139 aaKnown RBP11.36□□□□□ -0.59
CHD1L-210ENST00000622533 B3GALT1Q9Y5Z6 326 aa11.36□□□□□ -0.59
CHD1L-210ENST00000622533 FAM24AA6NFZ4 105 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 GUCA1AP43080 201 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 ZNF133P52736 654 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 PIGPP57054 158 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 C1orf87Q8N0U7 546 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 C10orf35Q96D05 121 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 SHDQ96IW2 340 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 SPAG17Q6Q759 2223 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 CCDC187A0A096LP49 1063 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 SLC33A1O00400 549 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 TRAF3IP2O43734 574 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 CTSDP07339 412 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 PCP4P48539 62 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 SLC10A1Q14973 349 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 SLC16A14Q7RTX9 510 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 ANKRD37Q7Z713 158 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 NFAM1Q8NET5 270 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 ZNF501Q96CX3 271 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-210ENST00000622533 PGAM5Q96HS1 289 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 METTL9Q9H1A3 318 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 LIME1Q9H400 295 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 CBLN4Q9NTU7 201 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 PADI1Q9ULC6 663 aa11.35□□□□□ -0.59
CHD1L-210ENST00000622533 A0A0U1RQV5 110 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 LOC102725191A0A1B0GVB3 256 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 DBHP09172 617 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 ZNF43P17038 809 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 RAB30Q15771 203 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 HIST3H3Q16695 136 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 FBXW12Q6X9E4 464 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 Q6ZS52 159 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 STT3BQ8TCJ2 826 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 RLN3Q8WXF3 142 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 HAS2Q92819 552 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 PCED1AQ9H1Q7 454 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 FGF21Q9NSA1 209 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 IGKV1-9A0A0C4DH69 117 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 CCDC163A0A0D9SF12 145 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 DVL1O14640 695 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 RER1O15258 196 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 OR4A8P0C604 315 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 PNLIPP16233 465 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 CDAP32320 146 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 FXYD4P59646 89 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 PHLDA2Q53GA4 152 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 TMEM123Q8N131 208 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 SUMF1Q8NBK3 374 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 PPP1R14DQ9NXH3 145 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 ZNF319Q9P2F9 582 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 PITPNC1Q9UKF7 332 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 MCTS1Q9ULC4 181 aaKnown RBP11.34□□□□□ -0.59
CHD1L-210ENST00000622533 RP1P56715 2156 aa11.34□□□□□ -0.59
CHD1L-210ENST00000622533 IGLV3-12A0A075B6K2 115 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 IGHV3-20A0A0C4DH32 117 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 IFNL4K9M1U5 179 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 EFNA2O43921 213 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 IGLV3-1P01715 115 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 MMP9P14780 707 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 RPL23AP62750 156 aaKnown RBP11.33□□□□□ -0.6
CHD1L-210ENST00000622533 HLA-DRB3P79483 266 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 EWSR1Q01844 656 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHD1L-210ENST00000622533 GPR157Q5UAW9 335 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 C16orf47Q6ZP98 133 aaPredicted RBP11.33□□□□□ -0.6
CHD1L-210ENST00000622533 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 RABEPKQ7Z6M1 372 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 OR4X1Q8NH49 305 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
CHD1L-210ENST00000622533 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 ELL3Q9HB65 397 aaPredicted RBP11.33□□□□□ -0.6
CHD1L-210ENST00000622533 SLC7A11Q9UPY5 501 aa11.33□□□□□ -0.6
CHD1L-210ENST00000622533 SHISA7A6NL88 538 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms