RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ZNF107Q9UII5 783 aaPredicted RBP12.01□□□□□ -0.49
CLTCL1-212ENST00000622493 A6NNC1 897 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 SRRM5B3KS81 715 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 HS3ST1O14792 307 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 GLAP06280 429 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 CSF1P09603 554 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 CBX5P45973 191 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 RNASE12Q5GAN4 147 aaKnown RBP12□□□□□ -0.49
CLTCL1-212ENST00000622493 NKAPLQ5M9Q1 402 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 C6orf201Q7Z4U5 140 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 LRRC29Q8WV35 223 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
CLTCL1-212ENST00000622493 RCC2Q9P258 522 aaKnown RBP12□□□□□ -0.49
CLTCL1-212ENST00000622493 GLS2Q9UI32 602 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 ELF5Q9UKW6 265 aaPredicted RBP12□□□□□ -0.49
CLTCL1-212ENST00000622493 NPTNQ9Y639 398 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 ROS1P08922 2347 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 DOPEY1Q5JWR5 2465 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 CHD3Q12873 2000 aaKnown RBP12□□□□□ -0.49
CLTCL1-212ENST00000622493 ANKRD20A5PA0PJZ0 165 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 PLA2G10O15496 165 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 LHBP01229 141 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 RFX2P48378 723 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 PPOXP50336 477 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 CCL8P80075 99 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 GUCA2AQ02747 115 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 SRSF1Q07955 248 aaKnown RBP eCLIP12□□□□□ -0.49
CLTCL1-212ENST00000622493 ARFRP1Q13795 201 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 SMIM21Q3B7S5 101 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 ACP7Q6ZNF0 438 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 NOXA1Q86UR1 476 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 OR11L1Q8NGX0 322 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 SAP30LQ9HAJ7 183 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 SEBOXQ9HB31 216 aaPredicted RBP12□□□□□ -0.49
CLTCL1-212ENST00000622493 CBLN4Q9NTU7 201 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 PPP1R3CQ9UQK1 317 aa12□□□□□ -0.49
CLTCL1-212ENST00000622493 SH2D1BO14796 132 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 LYRM1O43325 122 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 SSX4O60224 188 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 KNG1P01042 644 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 RNF224P0DH78 156 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 IKZF1Q13422 519 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 SPRNQ5BIV9 151 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 MZT2BQ6NZ67 158 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 TRAPPC6BQ86SZ2 158 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 GCSAMQ8N6F7 178 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 ANGPTL6Q8NI99 470 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 NUDCD2Q8WVJ2 157 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 OCSTAMPQ9BR26 566 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 FAAP24Q9BTP7 215 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 GON7Q9BXV9 100 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 RNF7Q9UBF6 113 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 IL36RNQ9UBH0 155 aa11.99□□□□□ -0.49
CLTCL1-212ENST00000622493 LRRC30A6NM36 301 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 PYCARD-AS1I3L0S3 204 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 IFNL4K9M1U5 179 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 DEGS1O15121 323 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 IRF2P14316 349 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 HLA-DMAP28067 261 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 SNU13P55769 128 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 RBM39Q14498 530 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 OLFML2AQ68BL7 652 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 DTX2Q86UW9 622 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 C11orf54Q9H0W9 315 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 CACNG2Q9Y698 323 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 ABCA4P78363 2273 aa11.98□□□□□ -0.49
CLTCL1-212ENST00000622493 LINC00854A0A1B0GVQ3 168 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 FAM221AA4D161 298 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 NAP1L6A6NFF2 107 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 MCRIP1C9JLW8 97 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 SSX5O60225 188 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 ZNF44P15621 663 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 LMO1P25800 156 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 ERP29P30040 261 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 FAUP35544 74 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 TAS2R19P59542 299 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 PDCD1Q15116 288 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 Q6P435 159 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 RTN4RL2Q86UN3 420 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 TMEM229BQ8NBD8 167 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 MED30Q96HR3 178 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 CMSS1Q9BQ75 279 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 SULT4A1Q9BR01 284 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 IFT46Q9NQC8 304 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 ZNF581Q9P0T4 197 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 ANAPC10Q9UM13 185 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 ARFGEF3Q5TH69 2177 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 CLEC18AA5D8T8 446 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 MEIS3P1A6NDR6 274 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 WNT9BO14905 357 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 OR2H2O95918 312 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 DANCRP0C864 163 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 DTYMKP23919 212 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 DUSP1P28562 367 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 GMFBP60983 142 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 CLEC18BQ6UXF7 455 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms