RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TSSK2Q96PF2 358 aa6.57□□□□□ -1.36
TRIM49B-202ENST00000622138 ABHD14AQ9BUJ0 271 aa6.57□□□□□ -1.36
TRIM49B-202ENST00000622138 MRPL27Q9P0M9 148 aaKnown RBP6.57□□□□□ -1.36
TRIM49B-202ENST00000622138 CKLFQ9UBR5 152 aa6.57□□□□□ -1.36
TRIM49B-202ENST00000622138 CDC42EP3Q9UKI2 254 aa6.57□□□□□ -1.36
TRIM49B-202ENST00000622138 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
TRIM49B-202ENST00000622138 IGKV1D-42A0A075B6H8 117 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 A0A1W2PQF6 199 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 FITM1A5D6W6 292 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 H3BSH0 61 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 J3QW42 95 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 SEMA4FO95754 770 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 HRASP01112 189 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CELA2BP08218 269 aaPredicted RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF43P17038 809 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 GNRHRP30968 328 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 RBMXP38159 391 aaKnown RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CSNK1A1P48729 337 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 BLKP51451 505 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CLDN6P56747 220 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 TPPP2P59282 170 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 RAB11AP62491 216 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 RPL23AP62750 156 aaKnown RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CCL20P78556 96 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF92Q03936 586 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 MFGE8Q08431 387 aaPredicted RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 IL13RA2Q14627 380 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 PCK2Q16822 640 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 LINC01590Q5TEZ4 76 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 PRAMEF20Q5VT98 475 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 PRR27Q6MZM9 219 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF880Q6PDB4 577 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 PLXDC2Q6UX71 529 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF550Q7Z398 422 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CENPVQ7Z7K6 275 aaPredicted RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 C20orf196Q8IYI0 205 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CSNK1A1LQ8N752 337 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 SLC38A9Q8NBW4 561 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 OR10S1Q8NGN2 331 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 OR10AC1Q8NH08 325 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 BAHD1Q8TBE0 780 aaPredicted RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CPT1CQ8TCG5 803 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 FGF14Q92915 247 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF524Q96C55 264 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 BMFQ96LC9 184 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 C4orf45Q96LM5 186 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 P2RX4Q99571 388 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 KLHDC3Q9BQ90 382 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF700Q9H0M5 742 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 GPR84Q9NQS5 396 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 OBP2AQ9NY56 170 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 BET1LQ9NYM9 111 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 CISD1Q9NZ45 108 aaKnown RBP6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 OR6C3Q9NZP0 311 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 LRIT1Q9P2V4 623 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 SMPXQ9UHP9 88 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 LRP4O75096 1905 aa6.56□□□□□ -1.36
TRIM49B-202ENST00000622138 KNL1Q8NG31 2342 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 FAM166BA8MTA8 275 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 PROB1E7EW31 1015 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 TNFSF15O95150 251 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 CSTAP01040 98 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 FBXO45P0C2W1 286 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 ESDP10768 282 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 TCN2P20062 427 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 CTRLP40313 264 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 CDKN2AP42771 156 aaKnown RBP6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 DCAF7P61962 342 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 C1orf100Q5SVJ3 147 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 OTPQ5XKR4 325 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 PARM1Q6UWI2 310 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 RNF44Q7L0R7 432 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 LHFPL1Q86WI0 220 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 GVQW1Q8N7I0 195 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 GATSQ8NAP1 163 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 OR51G1Q8NGK1 321 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 BCL2L2Q92843 193 aaPredicted RBP6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 RERGQ96A58 199 aaPredicted RBP6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 DDIT4LQ96D03 193 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 VSTM2LQ96N03 204 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 LMF2Q9BU23 707 aaKnown RBP6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 FAM60AQ9NP50 221 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF581Q9P0T4 197 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 CACNA1IQ9P0X4 2223 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 TRAV1-1A0A0B4J248 108 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF320A2RRD8 509 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 VSTM2BA6NLU5 285 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 H7C1C5 153 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 ARPC3O15145 178 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 TOX4O94842 621 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 CA3P07451 260 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 IGFBP3P17936 291 aaPredicted RBP6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 ZNF10P21506 573 aaPredicted RBP6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 MSR1P21757 451 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 CCKBRP32239 447 aa6.55□□□□□ -1.36
TRIM49B-202ENST00000622138 SRP14P37108 136 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms