RNA–Protein interactions for RNA: ENST00000622017.4

TRO-225, Transcript of trophinin, human

APPRIS ALT2 TSL 5 BASIC

Gene TRO, Length 1,403 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-225	ENST00000622017	PGA5	P0DJD9	388 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	APOBEC3A	P31941	199 aa	Predicted RBP	11.63	□□□□□ -0.55
TRO-225	ENST00000622017	CD200	P41217	278 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	MAB21L1	Q13394	359 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	IL13RA2	Q14627	380 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	AGAP6	Q5VW22	663 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.63	□□□□□ -0.55
TRO-225	ENST00000622017	BTN2A1	Q7KYR7	527 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	C11orf53	Q8IXP5	236 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	FAM58A	Q8N1B3	248 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	BATF2	Q8N1L9	274 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	GVQW1	Q8N7I0	195 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.63	□□□□□ -0.55
TRO-225	ENST00000622017	EMG1	Q92979	244 aa	Known RBP	11.63	□□□□□ -0.55
TRO-225	ENST00000622017	ZNF488	Q96MN9	340 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	CCL19	Q99731	98 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	DHRS9	Q9BPW9	319 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	SYT3	Q9BQG1	590 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	MRPL37	Q9BZE1	423 aa	Known RBP	11.63	□□□□□ -0.55
TRO-225	ENST00000622017	MCUB	Q9NWR8	336 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	ZNF581	Q9P0T4	197 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	TAAR3P	Q9P1P4	343 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	LAMP3	Q9UQV4	416 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	APC	P25054	2843 aa		11.63	□□□□□ -0.55
TRO-225	ENST00000622017	ANKRD17	O75179	2603 aa	Known RBP	11.63	□□□□□ -0.55
TRO-225	ENST00000622017	SPG11	Q96JI7	2443 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	PLSCR5	A0PG75	271 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	OR7C1	O76099	320 aa	Predicted RBP	11.62	□□□□□ -0.55
TRO-225	ENST00000622017	PTBP3	O95758	552 aa	Known RBP	11.62	□□□□□ -0.55
TRO-225	ENST00000622017	FCER2	P06734	321 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	PRKACA	P17612	351 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	TBP	P20226	339 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	HLA-DMA	P28067	261 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	RAG2	P55895	527 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	MEF2D	Q14814	521 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	FAAP20	Q6NZ36	180 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.62	□□□□□ -0.55
TRO-225	ENST00000622017	HOGA1	Q86XE5	327 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	OR2Z1	Q8NG97	314 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	OR4D10	Q8NGI6	311 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	CYYR1	Q96J86	154 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	NRIP2	Q9BQI9	281 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	SULT4A1	Q9BR01	284 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	FAAP24	Q9BTP7	215 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	RCC2	Q9P258	522 aa	Known RBP	11.62	□□□□□ -0.55
TRO-225	ENST00000622017	AK3	Q9UIJ7	227 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	ITGB1BP2	Q9UKP3	347 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	PLCE1	Q9P212	2302 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	TACC2	O95359	2948 aa		11.62	□□□□□ -0.55
TRO-225	ENST00000622017	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.62	□□□□□ -0.55
TRO-225	ENST00000622017	ZSCAN5B	A6NJL1	495 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	PDCD1	Q15116	288 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	MUC15	Q8N387	334 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	POC1A	Q8NBT0	407 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	OR4S1	Q8NGB4	309 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	OR56B4	Q8NH76	319 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	CHAC2	Q8WUX2	184 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	GTF3A	Q92664	365 aa	Known RBP	11.61	□□□□□ -0.55
TRO-225	ENST00000622017	SNAPC3	Q92966	411 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	IFT22	Q9H7X7	185 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	SPACA1	Q9HBV2	294 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017	NUDT15	Q9NV35	164 aa		11.61	□□□□□ -0.55
TRO-225	ENST00000622017		M0QYG6	137 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	NDUFB6	O95139	128 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	DHFR	P00374	187 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	GLA	P06280	429 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	H2AFB2	P0C5Z0	115 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ZNF735	P0CB33	412 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	DTYMK	P23919	212 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	SERPINF1	P36955	418 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	SNU13	P55769	128 aa	Known RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ADIPOQ	Q15848	244 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ACTBL2	Q562R1	376 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	RNASE10	Q5GAN6	216 aa	Known RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ATAD3C	Q5T2N8	411 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	PRAMEF6	Q5VXH4	476 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	OR52W1	Q6IF63	320 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	OR51S1	Q8NGJ8	323 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	OR4K15	Q8NH41	348 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	NINJ1	Q92982	152 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ELMOD3	Q96FG2	381 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	CMSS1	Q9BQ75	279 aa	Known RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	CHST6	Q9GZX3	395 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	HES4	Q9HCC6	221 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	IL36RN	Q9UBH0	155 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	TRAV6	A0A075B6T7	132 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017		A0A0B4J293	547 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	IGHV3-64D	A0A0J9YX35	117 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017		A6NLC8	198 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	DISC1	C4P0D8	188 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	AMY2A	P04746	511 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	OR4A8	P0C604	315 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ZNF81	P51508	661 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	MRPS15	P82914	257 aa	Known RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	IKZF1	Q13422	519 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	ZNF146	Q15072	292 aa		11.6	□□□□□ -0.55
TRO-225	ENST00000622017	RBMS2	Q15434	407 aa	Known RBP	11.6	□□□□□ -0.55
TRO-225	ENST00000622017	MPPED2	Q15777	294 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms