RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 YIPF5Q969M3 257 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 C12orf43Q96C57 262 aaKnown RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 SMIM12Q96EX1 92 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 PIK3IP1Q96FE7 263 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 BTF3L4Q96K17 158 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 QKIQ96PU8 341 aaKnown RBP eCLIP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 OR11A1Q9GZK7 315 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 NANOGQ9H9S0 305 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 SPANXA1Q9NS26 97 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 TAS2R1Q9NYW7 299 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 RAB22AQ9UL26 194 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 MMP17Q9ULZ9 603 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 LSM5Q9Y4Y9 91 aaKnown RBP2.63□□□□□ -1.99
BRCA1-229ENST00000621897 HSPB11Q9Y547 144 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 SLC22A7Q9Y694 548 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 ZBED9Q6R2W3 1325 aa2.63□□□□□ -1.99
BRCA1-229ENST00000621897 CCNB3Q8WWL7 1395 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 TGIF2-C20orf24A0A0A6YYL0 155 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 A0A0G2JMP0 313 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 METTL15A6NJ78 407 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF705EA8MWA4 302 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 GPR31O00270 319 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 MFNGO00587 321 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 GABRPO00591 440 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 MBTPS2O43462 519 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 CHP2O43745 196 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 RP2O75695 350 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 CCNKO75909 580 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 KLK3P07288 261 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 GIPP09681 153 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 PGA4P0DJD7 388 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 PGA3P0DJD8 388 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 PGA5P0DJD9 388 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 FOLR1P15328 257 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 TCP1P17987 556 aaKnown RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 HIST1H1TP22492 207 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 SLC6A1P30531 599 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 PFN2P35080 140 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 GPR6P46095 362 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 VSX2P58304 361 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 SLC35A1P78382 337 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 BAXQ07812 192 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 TWF1Q12792 350 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 NRF1Q16656 503 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF630Q2M218 657 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 NSUN5P1Q3KNT7 163 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 ARHGAP11BQ3KRB8 267 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 TRMT12Q53H54 448 aaKnown RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 KLF17Q5JT82 389 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 KCTD16Q68DU8 428 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 ZFP1Q6P2D0 407 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 C12orf54Q6X4T0 127 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 IDO2Q6ZQW0 420 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 PEX26Q7Z412 305 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 GLT6D1Q7Z4J2 308 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 RAB43Q86YS6 212 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 FTMTQ8N4E7 242 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 OR2M7Q8NG81 312 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 OR4M2Q8NGB6 313 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 OR52E2Q8NGJ4 325 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 RDH5Q92781 318 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 FGF11Q92914 225 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 TMEM54Q969K7 222 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 CPNE2Q96FN4 548 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 OLFM3Q96PB7 478 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 P2RX4Q99571 388 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 SIGMAR1Q99720 223 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 SEC22CQ9BRL7 303 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 ACTR6Q9GZN1 396 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 OR51I1Q9H343 314 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 NMNAT1Q9HAN9 279 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-229ENST00000621897 TMEM9BQ9NQ34 198 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 ANGPT4Q9Y264 503 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 SIGLEC9Q9Y336 463 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 NRCAMQ92823 1304 aa2.62□□□□□ -1.99
BRCA1-229ENST00000621897 IGHV1OR21-1A0A087WYE8 117 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 PRORSD1PA6NEY8 169 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 F6UB75 175 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 F8W036 122 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 TCAPO15273 167 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 FOXH1O75593 365 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 LYPLA1O75608 230 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SCRG1O75711 98 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 UPK1BO75841 260 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 CYBAP13498 195 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 CD99P14209 185 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 CCR7P32248 378 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 TCTAP57738 103 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 RAB5BP61020 215 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 NAA20P61599 178 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 NUTF2P61970 127 aaKnown RBP2.61□□□□□ -1.99
BRCA1-229ENST00000621897 GNG3P63215 75 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 HIST1H3AP68431 136 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SLC7A9P82251 487 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 H3F3AP84243 136 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 EGFEM1PQ0D2K5 195 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SLC10A7Q0GE19 358 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 DAZ2Q13117 558 aaKnown RBP2.61□□□□□ -1.99
BRCA1-229ENST00000621897 PPP1R1AQ13522 171 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 IHHQ14623 411 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms