RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FBXL17Q9UF56 701 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 ZMIZ1Q9ULJ6 1067 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 NUP98P52948 1817 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 LRP5O75197 1615 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 PQLC2LA1A4F0 135 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 SLC2A10O95528 541 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 CD27P26842 260 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 FUT7Q11130 342 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 LRRC10Q5BKY1 277 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 COX20Q5RI15 118 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM211Q6ICI0 200 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 MORN4Q8NDC4 146 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF707Q96C28 371 aaPredicted RBP6.41□□□□□ -1.38
COLCA1-205ENST00000620864 RAB33BQ9H082 229 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF318Q5VUA4 2279 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 TCRBV5S2A0A599 114 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 DMRTA1Q5VZB9 504 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 ZBTB34Q8NCN2 500 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 ELF5Q9UKW6 265 aaPredicted RBP6.41□□□□□ -1.38
COLCA1-205ENST00000620864 FUT9Q9Y231 359 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 SCN8AQ9UQD0 1980 aa6.41□□□□□ -1.38
COLCA1-205ENST00000620864 PF4P02776 101 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 PF4V1P10720 104 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 HIST1H1DP16402 221 aaKnown RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 TNFRSF1AP19438 455 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 OPRK1P41145 380 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 CDKN2AP42771 156 aaKnown RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 SRSF5Q13243 272 aaKnown RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 MBNL1Q9NR56 388 aaKnown RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 CAMPP49913 170 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 TIAL1Q01085 375 aaKnown RBP eCLIP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 LRRTM3Q86VH5 581 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 UBE2DNLQ8IWF7 75 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 MUC20Q8N307 709 aaPredicted RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 LINC00052Q96N35 136 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 ZDHHC8Q9ULC8 765 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 CTXND1A0A1B0GTU2 59 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 ADAM20O43506 726 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 CDS2O95674 445 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 DNAL4O96015 105 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 HOXB1P14653 301 aaPredicted RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 SERF2P84101 59 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 RBPMS2Q6ZRY4 209 aaKnown RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 FAM219AQ8IW50 185 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 FBXL14Q8N1E6 418 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 ASB16Q96NS5 453 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 KLF16Q9BXK1 252 aaPredicted RBP6.4□□□□□ -1.38
COLCA1-205ENST00000620864 PROCRQ9UNN8 238 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 MOB4Q9Y3A3 225 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 A0A0B4J293 547 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 H3BMH7 237 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 H3BQ15 152 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 HMGN4O00479 90 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF749O43361 778 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 LYZL6O75951 148 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 CD22P20273 847 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 COL8A1P27658 744 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 WNT3P56703 355 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 PRTGQ2VWP7 1150 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 MVB12AQ96EY5 273 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 SLC52A3Q9NQ40 469 aa6.4□□□□□ -1.38
COLCA1-205ENST00000620864 NUP188Q5SRE5 1749 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 ITGB4P16144 1822 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 ANKRD20A5PA0PJZ0 165 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 M0R082 166 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 FOLR2P14207 255 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 SPINK2P20155 84 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 MEF2CQ06413 473 aaPredicted RBP6.4□□□□□ -1.39
COLCA1-205ENST00000620864 OR8B3Q8NGG8 313 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 P2RX4Q99571 388 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 GAL3ST2Q9H3Q3 398 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 SRD5A3Q9H8P0 318 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 WNT16Q9UBV4 365 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 HS3ST2Q9Y278 367 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 LIPGQ9Y5X9 500 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 CCDC88CQ9P219 2028 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 A0A1B0GX78 115 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 H0YIG0 161 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 OPRM1P35372 400 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 MAVSQ7Z434 540 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 DEFB108BQ8NET1 73 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 NEUROG1Q92886 237 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 ABHD14BQ96IU4 210 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 SDF2Q99470 211 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 TMEM208Q9BTX3 173 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 DDA1Q9BW61 102 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 MMP17Q9ULZ9 603 aa6.4□□□□□ -1.39
COLCA1-205ENST00000620864 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SNURFLB1AK76 121 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 RIPPLY3P57055 190 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 TMEM33P57088 247 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 RPS20P60866 119 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 FOXB2Q5VYV0 432 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SLC36A1Q7Z2H8 476 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms