RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FSTP19883 344 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 MSR1P21757 451 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 SNCAP37840 140 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 ARG2P78540 354 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 CCL20P78556 96 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 MS4A18Q3C1V0 323 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 LANCL3Q6ZV70 420 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 CARFQ8N187 725 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 RDH5Q92781 318 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 GPR61Q9BZJ8 451 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 OBP2BQ9NPH6 170 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 SLC39A9Q9NUM3 307 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 METTL1Q9UBP6 276 aaKnown RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 DOCK11Q5JSL3 2073 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 WDFY4Q6ZS81 3184 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 NUDT19A8MXV4 375 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 PIGPP57054 158 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 MLF1P58340 268 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 PNLIPRP3Q17RR3 467 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 PDLIM3Q53GG5 364 aaPredicted RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 LINC00696Q6ZRV3 163 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 YRDCQ86U90 279 aaKnown RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 WDR5BQ86VZ2 330 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 LGI3Q8N145 548 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 GJC3Q8NFK1 279 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 DOK5Q9P104 306 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 MCTS1Q9ULC4 181 aaKnown RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 TUSC2O75896 110 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 DXOO77932 396 aaKnown RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 SCGB1D1O95968 90 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 FAHP16930 419 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 NKX2-1P43699 371 aaPredicted RBP6.1□□□□□ -1.43
NEDD9-216ENST00000620854 GABRA4P48169 554 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 RAB5CP51148 216 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 QRFPP83859 136 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 SSX9Q7RTT3 188 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 ARRDC1Q8N5I2 433 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 OR10S1Q8NGN2 331 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 OR1J1Q8NGS3 322 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 UBALD1Q8TB05 177 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 FER1L6-AS2Q96M78 137 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 WFDC1Q9HC57 220 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 PARP11Q9NR21 331 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 FAM206AQ9NX38 181 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 GFOD1Q9NXC2 390 aa6.1□□□□□ -1.43
NEDD9-216ENST00000620854 TMEM14DPA8MWL7 114 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 H0YL77 283 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 HS3ST1O14792 307 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 WDR1O75083 606 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 ONECUT2O95948 504 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CLPSP04118 112 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR5H8P0DN80 308 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 FPR2P25090 351 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 DUSP1P28562 367 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 GPX4P36969 197 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 MMP16P51512 607 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 SSR4P51571 173 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 SLC35A1P78382 337 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 EXT1Q16394 746 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 DHRS13Q6UX07 377 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 SPNS3Q6ZMD2 512 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 RPS19BP1Q86WX3 136 aaKnown RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 C9orf40Q8IXQ3 194 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 NECAP1Q8NC96 275 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR8B12Q8NGG6 310 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 FAAP24Q9BTP7 215 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 VN1R1Q9GZP7 353 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OPA3Q9H6K4 179 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 SEBOXQ9HB31 216 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 C19orf12Q9NSK7 152 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 GNG13Q9P2W3 67 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 H3BMH7 237 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CYB5BO43169 146 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CST7O76096 145 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 MBPP02686 304 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR5AC1P0C628 307 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 PRF1P14222 555 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 FABP4P15090 132 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 GABRA2P47869 451 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 ERVK-16P61578 105 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 UNQ6494/PRO21346Q6UXR6 183 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 UBAC2Q8NBM4 344 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR52M1Q8NGK5 317 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 MARS2Q96GW9 593 aaKnown RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 RNF122Q9H9V4 155 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 LOC390937A0A1W2PQ73 354 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 E9PLN8 166 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 M0R135 149 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 ZNHIT1O43257 154 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CARD18P57730 90 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 RPS23P62266 143 aaKnown RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 HTD2P86397 168 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 ZNF266Q14584 549 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms