RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ZNF69Q9UC07 566 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 RAB22AQ9UL26 194 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 INSIG2Q9Y5U4 225 aa13.44□□□□□ -0.26
CD40-207ENST00000620709 PPIAL4EA0A075B759 164 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 FAM230AA0A1W2PPH8 454 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 TMEM89A2RUT3 159 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 F5H0A9 414 aaPredicted RBP13.43□□□□□ -0.26
CD40-207ENST00000620709 PPIAL4DF5H284 164 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 TPPPO94811 219 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 FSHBP01225 129 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 PPIAL4FP0DN26 164 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 CDK2P24941 298 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 MNDAP41218 407 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 PTGFRP43088 359 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 EFNB2P52799 333 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 ATP1B3P54709 279 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 GNB2P62879 340 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 PLA2G7Q13093 441 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 TMEM69Q5SWH9 247 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 STEAP3Q658P3 488 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 CRIP3Q6Q6R5 217 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 RNF144BQ7Z419 303 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 ZDHHC22Q8N966 263 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 C15orf40Q8WUR7 153 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 TNFAIP8L1Q8WVP5 186 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 SSBP3Q9BWW4 388 aaPredicted RBP13.43□□□□□ -0.26
CD40-207ENST00000620709 TMEM165Q9HC07 324 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 DIABLOQ9NR28 239 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 C14orf119Q9NWQ9 140 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 MPC1Q9Y5U8 109 aa13.43□□□□□ -0.26
CD40-207ENST00000620709 TMEM14DPA8MWL7 114 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 WNT2P09544 360 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 VSIG8P0DPA2 414 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 IL7P13232 177 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 UBA52P62987 128 aaKnown RBP13.42□□□□□ -0.26
CD40-207ENST00000620709 BAK1Q16611 211 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 RGS21Q2M5E4 152 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 TRIQKQ629K1 86 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 IZUMO1Q8IYV9 350 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 C1orf87Q8N0U7 546 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 BCL6BQ8N143 479 aaPredicted RBP13.42□□□□□ -0.26
CD40-207ENST00000620709 BOLLQ8N9W6 283 aaKnown RBP13.42□□□□□ -0.26
CD40-207ENST00000620709 C19orf18Q8NEA5 215 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 OR5D18Q8NGL1 313 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 DVL3Q92997 716 aaPredicted RBP13.42□□□□□ -0.26
CD40-207ENST00000620709 S100A13Q99584 98 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 CST11Q9H112 138 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 ATG5Q9H1Y0 275 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 UFSP2Q9NUQ7 469 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 MRPL15Q9P015 296 aaKnown RBP13.42□□□□□ -0.26
CD40-207ENST00000620709 MIOXQ9UGB7 285 aa13.42□□□□□ -0.26
CD40-207ENST00000620709 MRPS7Q9Y2R9 242 aaKnown RBP13.42□□□□□ -0.26
CD40-207ENST00000620709 A0A0A6YYH2 397 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 A6NJ64 397 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 CTDSPLO15194 276 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 XRCC3O43542 346 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 SCGNO76038 276 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 DEFA1P59665 94 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 DEFA3P59666 94 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 ZP1P60852 638 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 QRFPP83859 136 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 BAMBIQ13145 260 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 UNC119Q13432 240 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 OR8G1Q15617 311 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 CEACAM21Q3KPI0 293 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
CD40-207ENST00000620709 PRAMEF6Q5VXH4 476 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 OR10K2Q6IF99 312 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 BTNL3Q6UXE8 466 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 OR8B3Q8NGG8 313 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 OR11L1Q8NGX0 322 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 KCNG3Q8TAE7 436 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 NEIL1Q96FI4 390 aaPredicted RBP13.41□□□□□ -0.26
CD40-207ENST00000620709 C1orf147Q96MC9 270 aaPredicted RBP13.41□□□□□ -0.26
CD40-207ENST00000620709 HIST1H2AAQ96QV6 131 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 ABHD1Q96SE0 405 aa13.41□□□□□ -0.26
CD40-207ENST00000620709 MS4A7Q9GZW8 240 aaPredicted RBP13.41□□□□□ -0.26
CD40-207ENST00000620709 IGKV1-27A0A075B6S5 117 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 A8MXK9 166 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 CA6P23280 308 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 CD80P33681 288 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 PMELP40967 661 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 COMPP49747 757 aaPredicted RBP13.4□□□□□ -0.26
CD40-207ENST00000620709 TAS2R20P59543 309 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 SCN1BQ07699 218 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 FAM189A2Q15884 450 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 HPSE2Q8WWQ2 592 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 ING4Q9UNL4 249 aa13.4□□□□□ -0.26
CD40-207ENST00000620709 POLR3KQ9Y2Y1 108 aaPredicted RBP13.4□□□□□ -0.26
CD40-207ENST00000620709 A0A1W2PQ09 198 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 PQLC2LA1A4F0 135 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 OR5B21A6NL26 309 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 KDM4BO94953 1096 aa13.39□□□□□ -0.27
CD40-207ENST00000620709 HLA-DQB1P01920 261 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms