RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RRP9O43818 475 aaKnown RBP9.03□□□□□ -0.96
TARDBP-221ENST00000619555 TK1P04183 234 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 CDK1P06493 297 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 HSPA13P48723 471 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 GBX2P52951 348 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-221ENST00000619555 DLX6P56179 175 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 SLC35A2P78381 396 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 CDK5R1Q15078 307 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 C11orf88Q6PI97 169 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 RNF144BQ7Z419 303 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 EGFL6Q8IUX8 553 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 LYG1Q8N1E2 194 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 STX19Q8N4C7 294 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 TRMT10AQ8TBZ6 339 aaKnown RBP9.03□□□□□ -0.96
TARDBP-221ENST00000619555 FGGYQ96C11 551 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 CHST5Q9GZS9 411 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 RANBP3Q9H6Z4 567 aaPredicted RBP9.03□□□□□ -0.96
TARDBP-221ENST00000619555 HES4Q9HCC6 221 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 RAB18Q9NP72 206 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 RAB26Q9ULW5 256 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 POLDIP2Q9Y2S7 368 aa9.03□□□□□ -0.96
TARDBP-221ENST00000619555 TRBV2A0A0J9YWF9 115 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 hCG_1809904A0A1W2PP81 198 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 A0A1W2PPE2 198 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 FAM230AA0A1W2PPH8 454 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 A0A1W2PR64 198 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 A0A1W2PRV1 198 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 TMEM212A6NML5 194 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 C17orf98A8MV24 154 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 F8VVB4 439 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 F8VWA3 439 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 K7N7A8 449 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 INMTO95050 263 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 PRB2P02812 416 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OPN1MWP04001 364 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 CCDC159P0C7I6 412 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 CRHBPP24387 322 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 MPZP25189 248 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 ERVK11-1P61568 191 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 COL10A1Q03692 680 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 MRPL28Q13084 256 aaKnown RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 HABP2Q14520 560 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 IRF3Q14653 427 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 LDLRAD2Q5SZI1 272 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 DMKNQ6E0U4 476 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 RPL22L1Q6P5R6 122 aaKnown RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 CCBE1Q6UXH8 406 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 TMPRSS11AQ6ZMR5 421 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 ZNF676Q8N7Q3 588 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 NANOGP1Q8N7R0 232 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OR13C3Q8NGS6 347 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OR13C5Q8NGS8 318 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OR5AK2Q8NH90 309 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 OR5M11Q96RB7 305 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 ZNF184Q99676 751 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 NPFFR1Q9GZQ6 430 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 DUSP21Q9H596 190 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 ZNF702PQ9H963 129 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 BABAM2Q9NXR7 383 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 HHLA2Q9UM44 414 aa9.02□□□□□ -0.97
TARDBP-221ENST00000619555 LSM2Q9Y333 95 aaKnown RBP9.02□□□□□ -0.97
TARDBP-221ENST00000619555 PNMA8CA0A1B0GUJ8 204 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 A6NDX4 124 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 VGLL3A8MV65 326 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 ZNF737O75373 536 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 MT-ND2P03891 347 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 ARG1P05089 322 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 WNT4P56705 351 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 RPS11P62280 158 aaKnown RBP eCLIP9.01□□□□□ -0.97
TARDBP-221ENST00000619555 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 SSX2Q16385 188 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 NSUN5P1Q3KNT7 163 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 CCDC58Q4VC31 144 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 SAMD5Q5TGI4 173 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 RNLSQ5VYX0 342 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 LIAT1Q6ZQX7 453 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 TMEM219Q86XT9 240 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 ASCC1Q8N9N2 400 aaKnown RBP9.01□□□□□ -0.97
TARDBP-221ENST00000619555 CCDC54Q8NEL0 328 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 C10orf35Q96D05 121 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 MYCBPQ99417 103 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-221ENST00000619555 CDCA4Q9BXL8 241 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 PKIBQ9C010 78 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 SERTAD4Q9NUC0 356 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 CHCHD3Q9NX63 227 aaKnown RBP9.01□□□□□ -0.97
TARDBP-221ENST00000619555 MTCH1Q9NZJ7 389 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 TCF19Q9Y242 345 aa9.01□□□□□ -0.97
TARDBP-221ENST00000619555 TMEM82A0PJX8 343 aa9□□□□□ -0.97
TARDBP-221ENST00000619555 ODF3BA8MYP8 253 aa9□□□□□ -0.97
TARDBP-221ENST00000619555 MYL12BO14950 172 aa9□□□□□ -0.97
TARDBP-221ENST00000619555 DENRO43583 198 aaKnown RBP9□□□□□ -0.97
TARDBP-221ENST00000619555 CHRM2P08172 466 aa9□□□□□ -0.97
TARDBP-221ENST00000619555 ZNF728P0DKX0 622 aa9□□□□□ -0.97
TARDBP-221ENST00000619555 CD28P10747 220 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms