RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 OAZ3Q9UMX2 235 aa9.6□□□□□ -0.87
UPF3B-204ENST00000619445 DAPL1A0PJW8 107 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 G3V4G9 280 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 M0QZK8 103 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 ENTPD6O75354 484 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 IGHA1P01876 353 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 CSN2P05814 226 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 HTR1AP08908 422 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 LMO1P25800 156 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 PAX6P26367 422 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 RAB13P51153 203 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 SNRPGP62308 76 aaKnown RBP9.59□□□□□ -0.87
UPF3B-204ENST00000619445 NSUN5P1Q3KNT7 163 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 CCBE1Q6UXH8 406 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-204ENST00000619445 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 C10orf67Q8IYJ2 551 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 ACBD7Q8N6N7 88 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-204ENST00000619445 CORO2AQ92828 525 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 FGGYQ96C11 551 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 R3HDM4Q96D70 268 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 HRASLS5Q96KN8 279 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 COMMD4Q9H0A8 199 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 PCDHB16Q9NRJ7 776 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 RBFOX1Q9NWB1 397 aaKnown RBP9.59□□□□□ -0.87
UPF3B-204ENST00000619445 HILPDAQ9Y5L2 63 aa9.59□□□□□ -0.87
UPF3B-204ENST00000619445 LEUTXA8MZ59 168 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 PSPNO60542 156 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 KDM4BO94953 1096 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 ALX3O95076 343 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 APOL3O95236 402 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 DBTP11182 482 aaKnown RBP9.58□□□□□ -0.88
UPF3B-204ENST00000619445 BCL3P20749 454 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 CD34P28906 385 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 KIR3DL2P43630 455 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 OR3A1P47881 315 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 PRRX1P54821 245 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF85Q03923 595 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 KPNB1Q14974 876 aaKnown RBP9.58□□□□□ -0.88
UPF3B-204ENST00000619445 TP53I3Q53FA7 332 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 TCF23Q7RTU1 214 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 ABHD12Q8N2K0 398 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 OR52N4Q8NGI2 321 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 OR4D6Q8NGJ1 314 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 OR5D14Q8NGL3 314 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 STMN2Q93045 179 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 ADAT3Q96EY9 351 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-204ENST00000619445 CHST6Q9GZX3 395 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 NECAP2Q9NVZ3 263 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 OR6C3Q9NZP0 311 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 FRRS1LQ9P0K9 344 aa9.58□□□□□ -0.88
UPF3B-204ENST00000619445 IGKV1-9A0A0C4DH69 117 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 H3BSH0 61 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 TOR1AO14656 332 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 PIN1P1O15428 100 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 MPZL2O60487 215 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 INMTO95050 263 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 OR2H2O95918 312 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 CD28P10747 220 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 POLR2IP36954 125 aaKnown RBP9.57□□□□□ -0.88
UPF3B-204ENST00000619445 MNDAP41218 407 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 PTGFRP43088 359 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 NPBWR2P48146 333 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 HABP2Q14520 560 aaPredicted RBP9.57□□□□□ -0.88
UPF3B-204ENST00000619445 ZFP1Q6P2D0 407 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 RDH10Q8IZV5 341 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 OR4P4Q8NGL7 312 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 OR13C3Q8NGS6 347 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 RNFT2Q96EX2 444 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 Q96MT0 163 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
UPF3B-204ENST00000619445 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 ZCCHC4Q9H5U6 513 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 GSTK1Q9Y2Q3 226 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF281Q9Y2X9 895 aa9.57□□□□□ -0.88
UPF3B-204ENST00000619445 ODAMA1E959 279 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 SAC3D1A6NKF1 404 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 TMEM212A6NML5 194 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF729A6NN14 1252 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-204ENST00000619445 J3QRE1 110 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 SIRPB1O00241 398 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 OR2F2O95006 317 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 DUS4LO95620 317 aaKnown RBP9.56□□□□□ -0.88
UPF3B-204ENST00000619445 CLIC3O95833 236 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 FADS2O95864 444 aaKnown RBP9.56□□□□□ -0.88
UPF3B-204ENST00000619445 ALPLP05186 524 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 CCDC159P0C7I6 412 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF44P15621 663 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 CDK2P24941 298 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 DUSP1P28562 367 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 CD83Q01151 205 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 ALKBH1Q13686 389 aaKnown RBP9.56□□□□□ -0.88
UPF3B-204ENST00000619445 LDLRAD2Q5SZI1 272 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 SERPINA12Q8IW75 414 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 SYS1Q8N2H4 156 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 TPRX1Q8N7U7 411 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF565Q8N9K5 539 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 WFDC9Q8NEX5 89 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms