RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 U3KQA8 63 aa17.64■□□□□ 0.41
NEK3-208ENST00000618534 PDCD6O75340 191 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 ZNF32P17041 273 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 HTR5AP47898 357 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 OR2C3Q8N628 320 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 LFNGQ8NES3 379 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 ABHD14AQ9BUJ0 271 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 PUS1Q9Y606 427 aaKnown RBP eCLIP17.63■□□□□ 0.41
NEK3-208ENST00000618534 WDFY3Q8IZQ1 3526 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 IGSF23A1L1A6 192 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 CCL20P78556 96 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 MALLQ13021 153 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 ALKBH3Q96Q83 286 aaPredicted RBP17.63■□□□□ 0.41
NEK3-208ENST00000618534 C11orf1Q9H5F2 150 aa17.63■□□□□ 0.41
NEK3-208ENST00000618534 C3orf85A0A1B0GTC6 90 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 PPYP01298 95 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 CST2P09228 141 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 TCN2P20062 427 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 RPS23P62266 143 aaKnown RBP17.62■□□□□ 0.41
NEK3-208ENST00000618534 IGSF11Q5DX21 431 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 SUMF2Q8NBJ7 301 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 NTNG2Q96CW9 530 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 MALSU1Q96EH3 234 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 ZNF576Q9H609 170 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 TMEM38BQ9NVV0 291 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 IGHV1-45A0A0A0MS14 117 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 OR6C6A6NF89 314 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 TXNL1O43396 289 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 CLN5O75503 358 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 ITGA3P26006 1051 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 ATP6V0CP27449 155 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 TSC22D1Q15714 1073 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 SOHLH1Q5JUK2 328 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 OR2G3Q8NGZ4 309 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 TCEAL7Q9BRU2 100 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 ZNF442Q9H7R0 627 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 P4HTMQ9NXG6 502 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 IL36GQ9NZH8 169 aa17.62■□□□□ 0.41
NEK3-208ENST00000618534 LOC102723996A0A087X1L8 192 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 hCG_38984A0A1B0GV85 526 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 A0A1B0GW64 132 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 CDRT15L2A8MXV6 281 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 MPPED1O15442 326 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 OMGP23515 440 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 RBM11P57052 281 aaKnown RBP17.61■□□□□ 0.41
NEK3-208ENST00000618534 POLR2GP62487 172 aaKnown RBP eCLIP17.61■□□□□ 0.41
NEK3-208ENST00000618534 RAC1P63000 192 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 ZNF92Q03936 586 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 DAZAP2Q15038 168 aaPredicted RBP17.61■□□□□ 0.41
NEK3-208ENST00000618534 PLCXD3Q63HM9 321 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 SLAMF9Q96A28 289 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 PHF7Q9BWX1 381 aaPredicted RBP17.61■□□□□ 0.41
NEK3-208ENST00000618534 CACNA1EQ15878 2313 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 TRDCB7Z8K6 153 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 C5orf24Q7Z6I8 188 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 ZFP62Q8NB50 900 aaPredicted RBP17.61■□□□□ 0.41
NEK3-208ENST00000618534 PIGCQ92535 297 aa17.61■□□□□ 0.41
NEK3-208ENST00000618534 ZNF724A8MTY0 619 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 OR7C1O76099 320 aaPredicted RBP17.6■□□□□ 0.41
NEK3-208ENST00000618534 CDS2O95674 445 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 UMODP07911 640 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 FUT6P51993 359 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 RAB1AP62820 205 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 PSG4Q00888 419 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 CALHM1Q8IU99 346 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 FGFBP3Q8TAT2 258 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 IMMP1LQ96LU5 166 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 YPEL4Q96NS1 127 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 TMEM222Q9H0R3 208 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 SLC7A11Q9UPY5 501 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 AP4M1O00189 453 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 OR2C1O95371 312 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 COX6A1P12074 109 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 EPHA8P29322 1005 aaPredicted RBP17.6■□□□□ 0.41
NEK3-208ENST00000618534 NKX2-1P43699 371 aaPredicted RBP17.6■□□□□ 0.41
NEK3-208ENST00000618534 SSR4P51571 173 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 ZNF266Q14584 549 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 OR8B8Q15620 311 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 KRTAP27-1Q3LI81 207 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 TMEM211Q6ICI0 200 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 OR14L1PQ8NHC6 308 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 TMEM171Q8WVE6 324 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 MAGT1Q9H0U3 335 aa17.6■□□□□ 0.41
NEK3-208ENST00000618534 MRPS17Q9Y2R5 130 aaKnown RBP17.6■□□□□ 0.41
NEK3-208ENST00000618534 SSSCA1O60232 199 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 PITX3O75364 302 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 FUT3P21217 361 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 IGFBP4P22692 258 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 GNRHRP30968 328 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 NPBWR2P48146 333 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 SPSB3Q6PJ21 355 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 RBFOX3A6NFN3 312 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 TBC1D26Q86UD7 250 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 ZNF100Q8IYN0 542 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 GPHA2Q96T91 129 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 SF3B5Q9BWJ5 86 aaKnown RBP17.59■□□□□ 0.41
NEK3-208ENST00000618534 WNT5BQ9H1J7 359 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 WDR54Q9H977 334 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 SH2D2AQ9NP31 389 aa17.59■□□□□ 0.41
NEK3-208ENST00000618534 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms