RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 METAP1DQ6UB28 335 aaPredicted RBP12.87□□□□□ -0.35
RPP40-207ENST00000618533 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 JAGN1Q8N5M9 183 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 MRPS24Q96EL2 167 aaKnown RBP12.87□□□□□ -0.35
RPP40-207ENST00000618533 ELL3Q9HB65 397 aaPredicted RBP12.87□□□□□ -0.35
RPP40-207ENST00000618533 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 GHRLQ9UBU3 117 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
RPP40-207ENST00000618533 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
RPP40-207ENST00000618533 TRAV40A0A0B4J280 105 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 hCG_1809904A0A1W2PP81 198 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 A0A1W2PPE2 198 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 A0A1W2PR64 198 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 A0A1W2PRV1 198 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 FUOMA2VDF0 154 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 MAGEA13PA6NCF6 341 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 MGST3O14880 152 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 OR2H2O95918 312 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 CSN2P05814 226 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 SRMP19623 302 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
RPP40-207ENST00000618533 ARF6P62330 175 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 MEF2CQ06413 473 aaPredicted RBP12.86□□□□□ -0.35
RPP40-207ENST00000618533 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
RPP40-207ENST00000618533 GPR157Q5UAW9 335 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 USP43Q70EL4 1123 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 LYPD6Q86Y78 171 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 BPIFB2Q8N4F0 458 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 ZNF418Q8TF45 676 aaPredicted RBP12.86□□□□□ -0.35
RPP40-207ENST00000618533 TMEM203Q969S6 136 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 TBX15Q96SF7 602 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 UNKLQ9H9P5 680 aaKnown RBP12.86□□□□□ -0.35
RPP40-207ENST00000618533 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 ING4Q9UNL4 249 aa12.86□□□□□ -0.35
RPP40-207ENST00000618533 TMEM82A0PJX8 343 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 CCRL2O00421 344 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 TCF21O43680 179 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 HTR3BO95264 441 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 UBBP0CG47 229 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 ZNF44P15621 663 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 GABRR1P24046 479 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 RPS25P62851 125 aaKnown RBP12.85□□□□□ -0.35
RPP40-207ENST00000618533 GUCA2AQ02747 115 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 INSL4Q14641 139 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 GRK1Q15835 563 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 TMEM91Q6ZNR0 172 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 FAM185AQ8N0U4 392 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 OSR2Q8N2R0 312 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 JMJD8Q96S16 334 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 SUCNR1Q9BXA5 334 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 IFT22Q9H7X7 185 aa12.85□□□□□ -0.35
RPP40-207ENST00000618533 METTL8Q9H825 291 aaKnown RBP12.85□□□□□ -0.35
RPP40-207ENST00000618533 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
RPP40-207ENST00000618533 DEGS1O15121 323 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 PSPNO60542 156 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 CDRT1O95170 752 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 RBP4P02753 201 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 CD37P11049 281 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 GTF2F2P13984 249 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 DUSP1P28562 367 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 KCNJ3P48549 501 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 PSMD7P51665 324 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 GP2P55259 537 aaKnown RBP12.84□□□□□ -0.35
RPP40-207ENST00000618533 SNU13P55769 128 aaKnown RBP12.84□□□□□ -0.35
RPP40-207ENST00000618533 SSX1Q16384 188 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 TUSC1Q2TAM9 212 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 FAM27D1Q5T7N8 215 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 NCR3LG1Q68D85 454 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 AWAT2Q6E213 333 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 Q6P435 159 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 CD200R1LQ6Q8B3 271 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 LRRTM1Q86UE6 522 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 MUL1Q969V5 352 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
RPP40-207ENST00000618533 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 C19orf12Q9NSK7 152 aa12.84□□□□□ -0.35
RPP40-207ENST00000618533 A0A0G2JK05 382 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 TRDV1A0A1B0GX56 115 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 hADV38S2A0JD32 116 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 H3BUI4 141 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 SIRPB1O00241 398 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.36
RPP40-207ENST00000618533 IGHV4-38-2P0DP08 117 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 CALCBP10092 127 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 SERPINA2P20848 420 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 PRTN3P24158 256 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 PSMB9P28065 219 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 OR3A1P47881 315 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 EDDM3BP56851 147 aa12.83□□□□□ -0.36
RPP40-207ENST00000618533 RBM11P57052 281 aaKnown RBP12.83□□□□□ -0.36
RPP40-207ENST00000618533 FABP5Q01469 135 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms