RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 MRPL18Q9H0U6 180 aaKnown RBP13.46□□□□□ -0.26
COL5A1-208ENST00000618395 HS3ST3A1Q9Y663 406 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 COX11Q9Y6N1 276 aa13.46□□□□□ -0.26
COL5A1-208ENST00000618395 PARLQ9H300 379 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 SLCO2B1O94956 709 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 LINC00614P0C842 121 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 CIRBPQ14011 172 aaKnown RBP13.45□□□□□ -0.26
COL5A1-208ENST00000618395 OR5A1Q8NGJ0 315 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 MOB3AQ96BX8 217 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 TRBV9A0A0B4J1U6 114 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 M0R135 149 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF799Q96GE5 643 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 A0A1B0GW15 77 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 LHFPL4Q7Z7J7 247 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 KTI12Q96EK9 354 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-208ENST00000618395 SPTBN2O15020 2390 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 LRRK1Q38SD2 2015 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 SLC39A5Q6ZMH5 540 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 OR5AC2Q9NZP5 309 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 AUP1Q9Y679 476 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 DCCP43146 1447 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 TRAV8-2A0A0B4J237 113 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 HMGN4O00479 90 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 RBFOX2O43251 390 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL5A1-208ENST00000618395 TYMSP04818 313 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 ACP1P24666 158 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 MGAT2Q10469 447 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 MYBPHQ13203 477 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 RDH5Q92781 318 aa13.45□□□□□ -0.26
COL5A1-208ENST00000618395 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-208ENST00000618395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 A0A0G2JLL6 359 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 SH2D7A6NKC9 451 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 BCL2P10415 239 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 PRRT2Q7Z6L0 340 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 PTPMT1Q8WUK0 201 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 PRDX1Q06830 199 aaKnown RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 SLC25A42Q86VD7 318 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 ARIH2OSQ8N7S6 290 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 OR5R1Q8NH85 324 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 CD74P04233 296 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 HOXD4P09016 255 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 PDXPQ96GD0 296 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 LCORQ96JN0 433 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 HHIPQ96QV1 700 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 ACVR1Q04771 509 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 TMEM215Q68D42 235 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 OR10W1Q8NGF6 305 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 SSBP4Q9BWG4 385 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 SEBOXQ9HB31 216 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 TIAM2Q8IVF5 1701 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 KDM3BQ7LBC6 1761 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 MS4A18H0YCH9 400 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 CLDN2P57739 230 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 MS4A18Q3C1V0 323 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 MARCH3Q86UD3 253 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 OR4C13Q8NGP0 309 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 S1PR5Q9H228 398 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 PIAS3Q9Y6X2 628 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 CDKN2AP42771 156 aaKnown RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 DUSP5Q16690 384 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 ANKRD34AQ69YU3 496 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 PP6455Q8WZ26 134 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 TM4SF18Q96CE8 201 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 ATP5IP56385 69 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 C1orf185Q5T7R7 199 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 ATOH7Q8N100 152 aa13.44□□□□□ -0.26
COL5A1-208ENST00000618395 MRPL30Q8TCC3 161 aaKnown RBP13.44□□□□□ -0.26
COL5A1-208ENST00000618395 MEF2CQ06413 473 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-208ENST00000618395 WDR25Q64LD2 544 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-208ENST00000618395 GJB5O95377 273 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 CCR5P51681 352 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 COL9A2Q14055 689 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-208ENST00000618395 GPRIN1Q7Z2K8 1008 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 A0A0U1RQF3 1178 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 FOLR3P41439 243 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 OR4S2Q8NH73 311 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 ZBP1Q9H171 429 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 GBF1Q92538 1859 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 FAM157CP0CG43 387 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 HS3ST2Q9Y278 367 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 SFTPCP11686 197 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 HTR3DQ70Z44 454 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 RABEPKQ7Z6M1 372 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 PITX3O75364 302 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 KIR2DS2P43631 304 aa13.43□□□□□ -0.26
COL5A1-208ENST00000618395 PRSS37A4D1T9 235 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 DUSP8Q13202 625 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 SNAI3Q3KNW1 292 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ARHGAP5-AS1Q96IT6 56 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms