RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SKP2Q13309 424 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 PRICKLE4Q2TBC4 344 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 TMEM88Q6PEY1 159 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 FAAP24Q9BTP7 215 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 MPC1Q9Y5U8 109 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 TAF1LQ8IZX4 1826 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 FAM157AC9JC47 383 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 PYCARD-AS1I3L0S3 204 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 FCN1O00602 326 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 PPM1DO15297 605 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 SOX8P57073 446 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC25A40Q8TBP6 338 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF426Q9BUY5 554 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 SIRT3Q9NTG7 399 aaPredicted RBP9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 KIAA1324LA8MWY0 1029 aaPredicted RBP9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 CST4P01036 141 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 PTHLHP12272 177 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 CDC34P49427 236 aaPredicted RBP9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 RAC3P60763 192 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 PET117Q6UWS5 81 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 Q6ZS52 159 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF441Q8N8Z8 693 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 TP53I13Q8NBR0 393 aaPredicted RBP9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 A0A1B0GTQ1 180 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 TRDCB7Z8K6 153 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 CD96P40200 585 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 OR3A1P47881 315 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF66Q6ZN08 573 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 C10orf35Q96D05 121 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 TMPRSS13Q9BYE2 586 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 NAA60Q9H7X0 242 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 KCNE3Q9Y6H6 103 aa9.93□□□□□ -0.82
CCDC144B-208ENST00000618081 FAM87AP0C7U9 286 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 CADM3Q8N126 398 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 DOK5Q9P104 306 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 BRCA1P38398 1863 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 PDCD6O75340 191 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 ZBTB37Q5TC79 503 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 R4GN57 208 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 C19orf57Q0VDD7 668 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 TCTN1Q2MV58 587 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 INSIG2Q9Y5U4 225 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 RALGAPA2Q2PPJ7 1873 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 PLPP3O14495 311 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 CDC20Q12834 499 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 KCNMB1Q16558 191 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC25A35Q3KQZ1 300 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF547Q8IVP9 402 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 TMEM116Q8NCL8 245 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 MAP1LC3CQ9BXW4 147 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC37A1P57057 533 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 DMRTC1Q5HYR2 192 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 MRGPRDQ8TDS7 321 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 CT55Q8WUE5 264 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC35B3Q9H1N7 401 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 PHF3Q92576 2039 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 PNPP00491 289 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 KIR3DL2P43630 455 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 GLDNQ6ZMI3 551 aaPredicted RBP9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 OR6X1Q8NH79 312 aa9.92□□□□□ -0.82
CCDC144B-208ENST00000618081 PLPP2O43688 288 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 IL13RA2Q14627 380 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SP6Q3SY56 376 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 CCDC144NLQ6NUI1 221 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 Q6ZN92 141 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 LHX9Q9NQ69 397 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SIGLEC7Q9Y286 467 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 TCRBV5S2A0A599 114 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 ALX3O95076 343 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 UCNP55089 124 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 CLPPQ16740 277 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 OTPQ5XKR4 325 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF764Q96H86 408 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 TOLLIPQ9H0E2 274 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 HSPB8Q9UJY1 196 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SDK2Q58EX2 2172 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 NKX2-2O95096 273 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 FOXO1Q12778 655 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 ZNF793Q6ZN11 406 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 Q8WTZ3 238 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 PLEKHB1Q9UF11 243 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 DEDDO75618 318 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SCGB1D4Q6XE38 83 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 LINC00596Q86U02 117 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 DUSP18Q8NEJ0 188 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 NUBPLQ8TB37 319 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 WDR81Q562E7 1941 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 OR2W5A6NFC9 320 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 PHOX2AO14813 284 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 MBTPS2O43462 519 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 OR5AC1P0C628 307 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 RIGQ13278 110 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC25A42Q86VD7 318 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 DUSP21Q9H596 190 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms