RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RAB40AQ8WXH6 277 aa2.93□□□□□ -1.94
LPP-220ENST00000617246 SLAMF6Q96DU3 332 aa2.93□□□□□ -1.94
LPP-220ENST00000617246 LINC00052Q96N35 136 aa2.93□□□□□ -1.94
LPP-220ENST00000617246 HSD17B10Q99714 261 aaKnown RBP2.93□□□□□ -1.94
LPP-220ENST00000617246 DFFBO76075 338 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 PRSS57Q6UWY2 283 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 VOPP1Q96AW1 172 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CITED4Q96RK1 184 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TPPP3Q9BW30 176 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ASH2LQ9UBL3 628 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 MRPS18CQ9Y3D5 142 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 KCNE1BA0A087WTH5 132 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CD48P09326 243 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 RAB4BP61018 213 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CXCR4P61073 352 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TUSC1Q2TAM9 212 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 Q71RC1 249 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 OR9G1Q8NH87 305 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 PYURFQ96I23 114 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 REG4Q9BYZ8 158 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CCDC59Q9P031 241 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 C9JVG2 144 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CA11O75493 328 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ASIPP42127 132 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 FXYD6P3P58550 94 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ACOT6Q3I5F7 207 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 FAM162BQ5T6X4 162 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ADPRHL1Q8NDY3 354 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF775Q96BV0 537 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 EXTL2Q9UBQ6 330 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 F5H697 171 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TNFSF13O75888 250 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CTSLP07711 333 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 MAB21L1Q13394 359 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 EBPQ15125 230 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 OR5AP2Q8NGF4 316 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR4B1Q8NGF8 309 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR51L1Q8NGJ5 315 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 GTF2H4Q92759 462 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 LYRM2Q9NU23 88 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 VAPAQ9P0L0 249 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 NAGKQ9UJ70 344 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 C22orf46C9J442 243 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CD14P08571 375 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CBR1P16152 277 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF74Q16587 644 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 DMRTC2Q8IXT2 367 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 NECAP1Q8NC96 275 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 BCL2L2Q92843 193 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 SLC22A13Q9Y226 551 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 WASHC3Q9Y3C0 194 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ACOD1A6NK06 481 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 M0QX08 132 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR7C2O60412 319 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 C1QAP02745 245 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 FCER1GP30273 86 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 UCP2P55851 309 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF816Q0VGE8 651 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 TSPYL5Q86VY4 417 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 E7ESA3 106 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR10Z1Q8NGY1 313 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 RNF183Q96D59 192 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 PRADC1Q9BSG0 188 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ARMC1Q9NVT9 282 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF107Q9UII5 783 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 SMAD5-AS1Q9Y6J3 95 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TAAR5O14804 337 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 FGF17O60258 216 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ARAFP10398 606 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 MMP9P14780 707 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CCL18P55774 89 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF404Q494X3 552 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ACBD7Q8N6N7 88 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR10K1Q8NGX5 313 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CCL4L1Q8NHW4 92 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 TFR2Q9UP52 801 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 HCRTO43612 131 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ZNF32P17041 273 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CA6P23280 308 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 PTGER1P34995 402 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CD96P40200 585 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 HERVK_113P61574 105 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR8H3Q8N146 312 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR13C9Q8NGT0 318 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 DUX3Q96PT4 197 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CGREF1Q99674 301 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 NKX6-2Q9C056 277 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 IL21Q9HBE4 155 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 ACER3Q9NUN7 267 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 RCL1Q9Y2P8 373 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 SEC14L6B5MCN3 397 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 PIAS1O75925 651 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 SPATA46Q5T0L3 261 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 KANK2Q63ZY3 851 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 OR4C16Q8NGL9 310 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 SHOX2O60902 331 aaPredicted RBP2.92□□□□□ -1.94
LPP-220ENST00000617246 CLDN1O95832 211 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 PROCP04070 461 aa2.92□□□□□ -1.94
LPP-220ENST00000617246 CISD3P0C7P0 127 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms