RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 GABRA5P31644 462 aa20.44■□□□□ 0.86
VEGFA-227ENST00000615393 ZNF626Q68DY1 528 aa20.44■□□□□ 0.86
VEGFA-227ENST00000615393 LHFPL4Q7Z7J7 247 aa20.44■□□□□ 0.86
VEGFA-227ENST00000615393 OR11H6Q8NGC7 330 aa20.44■□□□□ 0.86
VEGFA-227ENST00000615393 CPNE2Q96FN4 548 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-227ENST00000615393 FGF20Q9NP95 211 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-227ENST00000615393 IRGMA1A4Y4 181 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 FUOMA2VDF0 154 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 WBP4O75554 376 aaKnown RBP20.43■□□□□ 0.86
VEGFA-227ENST00000615393 OR2H2O95918 312 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 LIMS3P0CW19 117 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 LIMS4P0CW20 117 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 DCKP27707 260 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 OR3A1P47881 315 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 P2RX3P56373 397 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 DYNC1I2Q13409 638 aaKnown RBP20.43■□□□□ 0.86
VEGFA-227ENST00000615393 KISS1Q15726 138 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 SMN1Q16637 294 aaKnown RBP20.43■□□□□ 0.86
VEGFA-227ENST00000615393 RNF144BQ7Z419 303 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 TRAPPC6BQ86SZ2 158 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 OR4C13Q8NGP0 309 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 MALSU1Q96EH3 234 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 C8orf4Q9NR00 106 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 FBLN5Q9UBX5 448 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 UBE2J1Q9Y385 318 aaPredicted RBP20.43■□□□□ 0.86
VEGFA-227ENST00000615393 SESN1Q9Y6P5 492 aa20.43■□□□□ 0.86
VEGFA-227ENST00000615393 VGLL3A8MV65 326 aa20.42■□□□□ 0.86
VEGFA-227ENST00000615393 TMEM225BP0DP42 221 aa20.42■□□□□ 0.86
VEGFA-227ENST00000615393 ZNF691Q5VV52 312 aa20.42■□□□□ 0.86
VEGFA-227ENST00000615393 RANBP3Q9H6Z4 567 aaPredicted RBP20.42■□□□□ 0.86
VEGFA-227ENST00000615393 ABCB10Q9NRK6 738 aa20.42■□□□□ 0.86
VEGFA-227ENST00000615393 MAGEB3O15480 346 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 ZNF44P15621 663 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 LMO1P25800 156 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 FAM189A2Q15884 450 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 CCDC58Q4VC31 144 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 TTC23Q5W5X9 447 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 CRIP3Q6Q6R5 217 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 TMPRSS11AQ6ZMR5 421 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 DTX3Q8N9I9 347 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 CHST4Q8NCG5 386 aa20.41■□□□□ 0.86
VEGFA-227ENST00000615393 RAB3AP20336 220 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 KIR2DS4P43632 304 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 GTF2A1P52655 376 aaPredicted RBP20.4■□□□□ 0.86
VEGFA-227ENST00000615393 ZP1P60852 638 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 SCN1BQ07699 218 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 SSX2Q16385 188 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 LRRC36Q1X8D7 754 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 PLA1AQ53H76 456 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 ASPHD2Q6ICH7 369 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 RPL22L1Q6P5R6 122 aaKnown RBP20.4■□□□□ 0.86
VEGFA-227ENST00000615393 C11orf88Q6PI97 169 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 DYNAPQ8N1N2 210 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 PIFOQ8TCI5 191 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 RPS4Y2Q8TD47 263 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 CYGBQ8WWM9 190 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 NPFFR1Q9GZQ6 430 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 TMEM133Q9H2Q1 129 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 GAL3ST2Q9H3Q3 398 aa20.4■□□□□ 0.86
VEGFA-227ENST00000615393 TRGV10A0A0A0MS01 117 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 IGHV2-26A0A0B4J1V2 119 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 CD2P06729 351 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 MYL12AP19105 171 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 ETV1P50549 477 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 IL18R1Q13478 541 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 MINOS1Q5TGZ0 78 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 PACRGLQ8N7B6 248 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 SETD9Q8NE22 299 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 OR2T6Q8NHC8 308 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 CNIH3Q8TBE1 160 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 GPR148Q8TDV2 347 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 GPER1Q99527 375 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 CDCA4Q9BXL8 241 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 CLEC7AQ9BXN2 247 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 MMP27Q9H306 513 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 MINOS1-NBL1R4GNA1 71 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 MGAM2Q2M2H8 2515 aa20.39■□□□□ 0.85
VEGFA-227ENST00000615393 CLIC3O95833 236 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 CSN2P05814 226 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 SOX2P48431 317 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 MTNR1BP49286 362 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 CDK5R1Q15078 307 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 OR52W1Q6IF63 320 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 PXT1Q8NFP0 134 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 PITPNC1Q9UKF7 332 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 TCF19Q9Y242 345 aa20.38■□□□□ 0.85
VEGFA-227ENST00000615393 EXOSC1Q9Y3B2 195 aaKnown RBP20.38■□□□□ 0.85
VEGFA-227ENST00000615393 A0A0G2JK05 382 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 DEGS1O15121 323 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 AESQ08117 197 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 MED21Q13503 144 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 LDLRAD2Q5SZI1 272 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 ZNF529Q6P280 563 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 Q6P435 159 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 SATL1Q86VE3 508 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 NDNFQ8TB73 568 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 RGP1Q92546 391 aaPredicted RBP20.37■□□□□ 0.85
VEGFA-227ENST00000615393 CORO2AQ92828 525 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 TAS2R3Q9NYW6 316 aa20.37■□□□□ 0.85
VEGFA-227ENST00000615393 DIMT1Q9UNQ2 313 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms