RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 SPAG16Q8N0X2 631 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 SDR9C7Q8NEX9 313 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 OR11H7Q8NGC8 314 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 QKIQ96PU8 341 aaKnown RBP eCLIP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 VPS29Q9UBQ0 182 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 TRAPPC1Q9Y5R8 145 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 TMEM14AQ9Y6G1 99 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PAPPAQ13219 1627 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 BORCS7-ASMTA0A0B4J1R7 106 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 TMEM72A0PK05 275 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 FABP12A6NFH5 140 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 C21orf140B9A014 251 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PRAMEF26H0Y7S4 382 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PSMD12O00232 456 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 EIF3HO15372 352 aaKnown RBP eCLIP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 OR7C2O60412 319 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 TRBV12-3P01733 135 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 C1QAP02745 245 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 CHTF8P0CG12 524 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PVALBP20472 110 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 LCN1P31025 176 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 CLDN12P56749 244 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 MXD1Q05195 221 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 SKP2Q13309 424 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 SLC10A1Q14973 349 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 MAPK14Q16539 360 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 MYPOPQ86VE0 399 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 POM121L12Q8N7R1 296 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 SDR42E1Q8WUS8 393 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 STARD4Q96DR4 205 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 DUS3LQ96G46 650 aaKnown RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PBOV1Q9GZY1 135 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PRTFDC1Q9NRG1 225 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PCYOX1Q9UHG3 505 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 NDRG2Q9UN36 371 aaKnown RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 CLUHO75153 1309 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 CEACAM18A8MTB9 384 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PPP5D1E7EU14 171 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 PDCD6O75340 191 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 SRP9P49458 86 aaKnown RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 MYL6P60660 151 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 RAP1AP62834 184 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 DYNC1I2Q13409 638 aaKnown RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 TEX30Q5JUR7 227 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 CDKL4Q5MAI5 379 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 LPCAT3Q6P1A2 487 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 ARL9Q6T311 187 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 C6orf223Q8N319 242 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 ZNRF2Q8NHG8 242 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 KIAA1143Q96AT1 154 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 ZNF599Q96NL3 588 aa1.17□□□□□ -2.22
BRCA2-207ENST00000614259 RPF2Q9H7B2 306 aaKnown RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 POLR3HQ9Y535 204 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 TNS1Q9HBL0 1735 aaKnown RBP1.17□□□□□ -2.22
BRCA2-207ENST00000614259 NCOA3Q9Y6Q9 1424 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 TEX48A0A1B0GUV7 120 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 C5orf63A6NC05 138 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 FOXH1O75593 365 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 CRYGDP07320 174 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 UBE2E1P51965 193 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 LIM2P55344 173 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 CXCR4P61073 352 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 RPS21P63220 83 aaKnown RBP1.16□□□□□ -2.22
BRCA2-207ENST00000614259 KLF9Q13886 244 aaPredicted RBP1.16□□□□□ -2.22
BRCA2-207ENST00000614259 ZCWPW2Q504Y3 356 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 FFAR4Q5NUL3 377 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 LY6G6FQ5SQ64 297 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 SMRP1Q8NCR6 262 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 OR6N1Q8NGY5 312 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 OR2L2Q8NH16 312 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 SPACA5Q96QH8 159 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 ZNF471Q9BX82 626 aaPredicted RBP1.16□□□□□ -2.22
BRCA2-207ENST00000614259 SPANXDQ9BXN6 97 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 THAP10Q9P2Z0 257 aaPredicted RBP1.16□□□□□ -2.22
BRCA2-207ENST00000614259 ENPP5Q9UJA9 477 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 PYCARDQ9ULZ3 195 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 KLF12Q9Y4X4 402 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 TSSC4Q9Y5U2 329 aaPredicted RBP1.16□□□□□ -2.22
BRCA2-207ENST00000614259 FAM240AA0A1B0GVK7 77 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 SYCE1LA8MT33 242 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 ENTPD6O75354 484 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 RCBTB2O95199 551 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 MPZL1O95297 269 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 HLA-DQA1P01909 254 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 FGGP02679 453 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 IDO1P14902 403 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 OPRL1P41146 370 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 NAA20P61599 178 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 OR1Q1Q15612 314 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 NHLRC3Q5JS37 347 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 SOHLH1Q5JUK2 328 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 BRMS1LQ5PSV4 323 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 VN1R4Q7Z5H5 301 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 ZNF677Q86XU0 584 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 GAPTQ8N292 157 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 C15orf56Q8N910 161 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 CYB561A3Q8NBI2 242 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 ITLN1Q8WWA0 313 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 OLFM3Q96PB7 478 aa1.16□□□□□ -2.22
BRCA2-207ENST00000614259 LLPHQ9BRT6 129 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms