RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 DAZAP2Q15038 168 aaPredicted RBP7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ZMYND11Q15326 602 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 IGFBP7Q16270 282 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 MSMPQ1L6U9 139 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ATAD3CQ5T2N8 411 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 VHLLQ6RSH7 139 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 IDO2Q6ZQW0 420 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 LRP11Q86VZ4 500 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 BEST4Q8NFU0 473 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 SNAPC3Q92966 411 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 RNASE6Q93091 150 aaKnown RBP7.56□□□□□ -1.2
CCDC47-207ENST00000612558 LRRC46Q96FV0 321 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF488Q96MN9 340 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 WFIKKN1Q96NZ8 548 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 SLC6A7Q99884 636 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 CMSS1Q9BQ75 279 aaKnown RBP7.56□□□□□ -1.2
CCDC47-207ENST00000612558 CHST6Q9GZX3 395 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 TLNRD1Q9H1K6 362 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF442Q9H7R0 627 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 SPACA1Q9HBV2 294 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF581Q9P0T4 197 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 EDARQ9UNE0 448 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 FLVCR2Q9UPI3 526 aa7.56□□□□□ -1.2
CCDC47-207ENST00000612558 A0A0A6YYJ9 748 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 PLSCR5A0PG75 271 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 UBE2QL1A1L167 161 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 C7orf66A4D0T2 115 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ABCD4O14678 606 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 NOS1APO75052 506 aaPredicted RBP7.55□□□□□ -1.2
CCDC47-207ENST00000612558 CCNKO75909 580 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 GHRHP01286 108 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 PMP2P02689 132 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 GLAP06280 429 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 AMY2BP19961 511 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 OR3A3P47888 321 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 TAS2R46P59540 309 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ADORA2A-AS1P86434 159 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 BSPH1Q075Z2 132 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 IKZF1Q13422 519 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 PDCD1Q15116 288 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 MICBQ29980 383 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 VAX1Q5SQQ9 334 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 SLC22A25Q6T423 547 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 C11orf53Q8IXP5 236 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 OR5H2Q8NGV7 314 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 GIMAP1Q8WWP7 306 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 MED30Q96HR3 178 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 CYYR1Q96J86 154 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 SYT3Q9BQG1 590 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 NRIP2Q9BQI9 281 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 GHITMQ9H3K2 345 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
CCDC47-207ENST00000612558 RCC2Q9P258 522 aaKnown RBP7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF230Q9UIE0 474 aaPredicted RBP7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ERRFI1Q9UJM3 462 aaPredicted RBP7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ROS1P08922 2347 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 ITPR1Q14643 2758 aa7.55□□□□□ -1.2
CCDC47-207ENST00000612558 A0A1B0GUH1 482 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 FAM90A27PA6NNH2 459 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 MCRIP1C9JLW8 97 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 PYCARD-AS1I3L0S3 204 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 NXPH2O95156 264 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 IL5P05113 134 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CSN2P05814 226 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CD200P41217 278 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 RRAS2P62070 204 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CD300CQ08708 224 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CHRFAM7AQ494W8 412 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 SCGB2B2Q4G0G5 96 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ARRDC1Q8N5I2 433 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 POC1AQ8NBT0 407 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 OR2Z1Q8NG97 314 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 OR5AP2Q8NGF4 316 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CA5BP1Q8WTZ4 195 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 MRPL24Q96A35 216 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 HDHD3Q9BSH5 251 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ALX4Q9H161 411 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 OR51J1Q9H342 316 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 IFT22Q9H7X7 185 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 C12orf4Q9NQ89 552 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CA10Q9NS85 328 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 TAAR3PQ9P1P4 343 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 IL36RNQ9UBH0 155 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 NDRG3Q9UGV2 375 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CACNA1BQ00975 2339 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 IGHV3-64DA0A0J9YX35 117 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 A6NLC8 198 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 DEGS1O15121 323 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 PTBP3O95758 552 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 RLN1P04808 185 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 FCGR3AP08637 254 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms