RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 UMODP07911 640 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 GPR12P47775 334 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 ZNF816Q0VGE8 651 aaPredicted RBP11.46□□□□□ -0.57
TCF3-220ENST00000611869 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 ZNF441Q8N8Z8 693 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 ZNF488Q96MN9 340 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 MPC1Q9Y5U8 109 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 ATP23Q9Y6H3 246 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 PLXNA2O75051 1894 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 ADAM20O43506 726 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 CD37P11049 281 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 RPS23P62266 143 aaKnown RBP11.46□□□□□ -0.57
TCF3-220ENST00000611869 UBE2V2Q15819 145 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 RPL7L1Q6DKI1 246 aaKnown RBP11.46□□□□□ -0.57
TCF3-220ENST00000611869 OR10V1Q8NGI7 309 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 PHF3Q92576 2039 aaKnown RBP11.46□□□□□ -0.57
TCF3-220ENST00000611869 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.57
TCF3-220ENST00000611869 FBXO17Q96EF6 278 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 IMMP1LQ96LU5 166 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 TINAGQ9UJW2 476 aa11.46□□□□□ -0.57
TCF3-220ENST00000611869 DHODHQ02127 395 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 TSC22D1Q15714 1073 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 GPR137Q96N19 417 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 FBXL17Q9UF56 701 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 A0A0G2JMM0 328 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 A0A1W2PPB8 328 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 A0A1W2PRS3 328 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 ZNF724A8MTY0 619 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 KIR3DP1A8MWS1 328 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 PLAURQ03405 335 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 FBXW9Q5XUX1 488 aa11.46□□□□□ -0.58
TCF3-220ENST00000611869 AGFG2O95081 481 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 CFDP00746 253 aaPredicted RBP11.45□□□□□ -0.58
TCF3-220ENST00000611869 CEACAM6P40199 344 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 RPUSD3Q6P087 351 aaKnown RBP11.45□□□□□ -0.58
TCF3-220ENST00000611869 SOSTQ9BQB4 213 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 DDA1Q9BW61 102 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 SLC2A9Q9NRM0 540 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 DEFB108AA8MXU0 73 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 ZIC3O60481 467 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 MT-CO2P00403 227 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 CLPSP04118 112 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 H2BFSP57053 126 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 SURF2Q15527 256 aaPredicted RBP11.45□□□□□ -0.58
TCF3-220ENST00000611869 MDP1Q86V88 176 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 Q8IYB0 196 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 ZNF837Q96EG3 531 aaPredicted RBP11.45□□□□□ -0.58
TCF3-220ENST00000611869 RHOFQ9HBH0 211 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 PURGQ9UJV8 347 aaKnown RBP11.45□□□□□ -0.58
TCF3-220ENST00000611869 GBF1Q92538 1859 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 FAM24AA6NFZ4 105 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 LRRC30A6NM36 301 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 MPPED1O15442 326 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 ENSAO43768 121 aaKnown RBP11.45□□□□□ -0.58
TCF3-220ENST00000611869 PPYP01298 95 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 RRASP10301 218 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 AQP3Q92482 292 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 RAB39BQ96DA2 213 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 HIPK2Q9H2X6 1198 aa11.45□□□□□ -0.58
TCF3-220ENST00000611869 DENND4CQ5VZ89 1909 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 CST4P01036 141 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 RPS16P62249 146 aaKnown RBP11.44□□□□□ -0.58
TCF3-220ENST00000611869 OR10Z1Q8NGY1 313 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 NIPSNAP3BQ9BS92 247 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 NARFLQ9H6Q4 476 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 NPDC1Q9NQX5 325 aaPredicted RBP11.44□□□□□ -0.58
TCF3-220ENST00000611869 GPR27Q9NS67 375 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 PSENENQ9NZ42 101 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 FANCMQ8IYD8 2048 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
TCF3-220ENST00000611869 OR13G1Q8NGZ3 307 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 GNPNAT1Q96EK6 184 aaPredicted RBP11.44□□□□□ -0.58
TCF3-220ENST00000611869 CLDN16Q9Y5I7 305 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 IGHV3-13P01766 116 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 IGHV3-7P01780 117 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 CELA3AP09093 270 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 TMEM33P57088 247 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 RAB11AP62491 216 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 C14orf79Q96F83 325 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 GNG13Q9P2W3 67 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 CENPFP49454 3210 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 CBR1P16152 277 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 OR3A1P47881 315 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 TAS2R30P59541 319 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 TAGLNQ01995 201 aaKnown RBP11.44□□□□□ -0.58
TCF3-220ENST00000611869 UNC119Q13432 240 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 COL19A1Q14993 1142 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 LYZL2Q7Z4W2 148 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 OR2J1Q9GZK6 312 aa11.44□□□□□ -0.58
TCF3-220ENST00000611869 PRSS50Q9UI38 385 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms