RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ELOA3CA0A087WX78 387 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-219ENST00000608720 M0R036 132 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 CST2P09228 141 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-219ENST00000608720 P2RY1P47900 373 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 RAC1P63000 192 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 EXT1Q16394 746 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 RSPO4Q2I0M5 234 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-219ENST00000608720 LIAT1Q6ZQX7 453 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 DMRTC2Q8IXT2 367 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-219ENST00000608720 AKR7LQ8NHP1 331 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 BORCS8Q96FH0 119 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 C18orf12Q96KH6 178 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 SMDT1Q9H4I9 107 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 LUZP4Q9P127 313 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
CTCFL-219ENST00000608720 IGKV1-27A0A075B6S5 117 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 IGHV1-45A0A0A0MS14 117 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 GJE1A6NN92 205 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 TSTD3H0UI37 97 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 SYNGR3O43761 229 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 CELA2AP08217 269 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 CCL3P10147 92 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 DUSP1P28562 367 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 IL13RA2Q14627 380 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 TGIF1Q15583 401 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 MIDNQ504T8 468 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 LGI3Q8N145 548 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 OR2AE1Q8NHA4 323 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 OR1F12Q8NHA8 337 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
CTCFL-219ENST00000608720 LURAP1Q96LR2 239 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 SSX3Q99909 188 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 PROK2Q9HC23 129 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 U3KQA8 63 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 A0A0J9YW62 118 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 A0A1B0GW64 132 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 YIF1AO95070 293 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 SFTPCP11686 197 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 SSR4P51571 173 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 UCP3P55916 312 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 LYZL2Q7Z4W2 148 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 NTNG2Q96CW9 530 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 ZNF837Q96EG3 531 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-219ENST00000608720 IMMP1LQ96LU5 166 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 ZNF700Q9H0M5 742 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 ZNF286AQ9HBT8 521 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 SPACA1Q9HBV2 294 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 OCIAD1Q9NX40 245 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 ZNF391Q9UJN7 358 aa12.72□□□□□ -0.37
CTCFL-219ENST00000608720 STRAPQ9Y3F4 350 aaKnown RBP12.72□□□□□ -0.37
CTCFL-219ENST00000608720 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 TNFSF11O14788 317 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 DNPH1O43598 174 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 NRASP01111 189 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 LCATP04180 440 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 FGF5P12034 268 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 FXYD4P59646 89 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 GUK1Q16774 197 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 M1APQ8TC57 530 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 BSCL2Q96G97 398 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-219ENST00000608720 JSRP1Q96MG2 331 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-219ENST00000608720 WFDC1Q9HC57 220 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 SLC2A9Q9NRM0 540 aa12.71□□□□□ -0.37
CTCFL-219ENST00000608720 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 CBR3O75828 277 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 DIRAS3O95661 229 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 NDUFB7P17568 137 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 CAMLGP49069 296 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 FOXO1Q12778 655 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 PHLDA2Q53GA4 152 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 TMEM42Q69YG0 159 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF774Q6NX45 483 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 SLC22A25Q6T423 547 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 CCDC71LQ8N9Z2 235 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 OR10AD1Q8NGE0 317 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 MSI2Q96DH6 328 aaKnown RBP12.7□□□□□ -0.38
CTCFL-219ENST00000608720 MEGF10Q96KG7 1140 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 RHOVQ96L33 236 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 PARP12Q9H0J9 701 aaKnown RBP12.7□□□□□ -0.38
CTCFL-219ENST00000608720 SH2D2AQ9NP31 389 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 DOK5Q9P104 306 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 UMAD1C9J7I0 102 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 GEMIN2O14893 280 aaKnown RBP12.7□□□□□ -0.38
CTCFL-219ENST00000608720 NME2P1O60361 137 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 LMO1P25800 156 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 FUT6P51993 359 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 RAC3P60763 192 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF616Q08AN1 781 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 IL11RAQ14626 422 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 CLEC9AQ6UXN8 241 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 FBXW12Q6X9E4 464 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF100Q8IYN0 542 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 OR13D1Q8NGV5 346 aa12.7□□□□□ -0.38
CTCFL-219ENST00000608720 SRXN1Q9BYN0 137 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms