RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 PPP3R1P63098 170 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 ADARB1P78563 741 aaKnown RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 GABPB1Q06547 395 aaPredicted RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 ACSM1Q08AH1 577 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 PDZK1IP1Q13113 114 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF273Q14593 569 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 CDK5R1Q15078 307 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 GRK1Q15835 563 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 CCDC58Q4VC31 144 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 SPIN3Q5JUX0 258 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 RPL22L1Q6P5R6 122 aaKnown RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 C1orf122Q6ZSJ8 110 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 AHSA2Q719I0 299 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 TRAPPC6BQ86SZ2 158 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 PNKDQ8N490 385 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 PARP16Q8N5Y8 322 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 ZSCAN4Q8NAM6 433 aaPredicted RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 PPP1R35Q8TAP8 253 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 GPR148Q8TDV2 347 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 SMIM19Q96E16 107 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 TMEM80Q96HE8 168 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 EAF1Q96JC9 268 aaPredicted RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 SNX22Q96L94 193 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 GPER1Q99527 375 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF649Q9BS31 505 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 FAM192AQ9GZU8 254 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 CHST6Q9GZX3 395 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 DPAGT1Q9H3H5 408 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 DCLRE1BQ9H816 532 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 UNKLQ9H9P5 680 aaKnown RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 HMG20AQ9NP66 347 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 EXOSC4Q9NPD3 245 aaKnown RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 TAS2R4Q9NYW5 299 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 ZNRD1Q9P1U0 126 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 DIMT1Q9UNQ2 313 aaKnown RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 GSTK1Q9Y2Q3 226 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 SF3B6Q9Y3B4 125 aaKnown RBP4.79□□□□□ -1.64
FOCAD-213ENST00000604254 HSPE1-MOB4S4R3N1 261 aa4.79□□□□□ -1.64
FOCAD-213ENST00000604254 MGAM2Q2M2H8 2515 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 IGKV1-12A0A0C4DH73 117 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 PNMA8CA0A1B0GUJ8 204 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 hADV38S2A0JD32 116 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 MEX3AA1L020 520 aaKnown RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 SH2D1BO14796 132 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF737O75373 536 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 KDM4BO94953 1096 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 OR2H2O95918 312 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 IGKV1D-12P01611 117 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TMEM225BP0DP42 221 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF44P15621 663 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 MDKP21741 143 aaPredicted RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 OMGP23515 440 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ADMP35318 185 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 IER3P46695 156 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 BMXP51813 675 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 RAG2P55895 527 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 LGALS4P56470 323 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TAS2R43P59537 309 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 SLC34A1Q06495 639 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 SCN1BQ07699 218 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ST3GAL4Q11206 333 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF146Q15072 292 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 KISS1Q15726 138 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 MIDNQ504T8 468 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 XAF1Q6GPH4 301 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 DHRS7BQ6IAN0 325 aaPredicted RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF782Q6ZMW2 699 aaPredicted RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 GDPGP1Q6ZNW5 385 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 SAXO1Q8IYX7 474 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 STX19Q8N4C7 294 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TPRX1Q8N7U7 411 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ZFP41Q8N8Y5 198 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 BPIFB6Q8NFQ5 453 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 OR51A2Q8NGJ7 313 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 OR13C5Q8NGS8 318 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 OR4F5Q8NH21 305 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 OR52N1Q8NH53 320 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 SGMS2Q8NHU3 365 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TNFAIP8L1Q8WVP5 186 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 RGP1Q92546 391 aaPredicted RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 DYRK2Q92630 601 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TAF15Q92804 592 aaKnown RBP eCLIP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TNFRSF14Q92956 283 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TMEM106AQ96A25 262 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 ZNF714Q96N38 554 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 HEXA-AS1Q9H8Q6 139 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 RHOFQ9HBH0 211 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 BABAM2Q9NXR7 383 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 CNOT2Q9NZN8 540 aaKnown RBP4.78□□□□□ -1.64
FOCAD-213ENST00000604254 CKLFQ9UBR5 152 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 CLEC2DQ9UHP7 191 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 VPREB3Q9UKI3 123 aa4.78□□□□□ -1.64
FOCAD-213ENST00000604254 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
FOCAD-213ENST00000604254 TRGV10A0A0A0MS01 117 aa4.77□□□□□ -1.65
FOCAD-213ENST00000604254 TMEM82A0PJX8 343 aa4.77□□□□□ -1.65
FOCAD-213ENST00000604254 FUOMA2VDF0 154 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms