RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 C1QL1O75973 258 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 TSPAN15O95858 294 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 GLP1RP43220 463 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 HERV-K104P61576 105 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 PEA15Q15121 130 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 ACER2Q5QJU3 275 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 ZFP82Q8N141 532 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 SLC35G3Q8N808 338 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 SYT3Q9BQG1 590 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 FUT3P21217 361 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 C9orf135Q5VTT2 229 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 CACFD1Q9UGQ2 172 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 TCFL5Q9UL49 500 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 POMT1Q9Y6A1 747 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 PPYP01298 95 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 DANCRP0C864 163 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 ASCL1P50553 236 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 AVPI1Q5T686 147 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 RSRP1Q9BUV0 290 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 PARPBPQ9NWS1 579 aa17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 RCL1Q9Y2P8 373 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-225ENST00000600733 PCSK5Q92824 1860 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 BORCS7-ASMTA0A0B4J1R7 106 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 MED19A0JLT2 244 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 ST8SIA3O43173 380 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 CCNOP22674 350 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 SNCAP37840 140 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 P2RY1P47900 373 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 DUSP3P51452 185 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 UCP3P55916 312 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 TMEM211Q6ICI0 200 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 HSD17B11Q8NBQ5 300 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 DMBX1Q8NFW5 382 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 GINS3Q9BRX5 216 aa17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 ESRP2Q9H6T0 727 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-225ENST00000600733 COLCA2A8K830 154 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 CYTIPO60759 359 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 SEC11BP0C7V7 166 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 CCL2P13500 99 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 HOXA6P31267 233 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 GPR157Q5UAW9 335 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 WDR5BQ86VZ2 330 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 HPSE2Q8WWQ2 592 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 C1QTNF5Q9BXJ0 243 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 CRIM1Q9NZV1 1036 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 KCNJ3P48549 501 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 GFRA1P56159 465 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 TRIM61Q5EBN2 209 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 SPSB4Q96A44 273 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 HS3ST6Q96QI5 342 aa17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 PAPOLGQ9BWT3 736 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 FBXO9Q9UK97 447 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-225ENST00000600733 A0A096LPE4 126 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 A0A1W2PPZ6 126 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 BCL3P20749 454 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 CAMLGP49069 296 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 CYB561P49447 251 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 IL13RA2Q14627 380 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 SPINK14Q6IE38 97 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 CCDC71LQ8N9Z2 235 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 OR56B2PQ8NGI1 322 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 CPNE4Q96A23 557 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 CLCC1Q96S66 551 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 GPHA2Q96T91 129 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 SCRT1Q9BWW7 348 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 C3orf85A0A1B0GTC6 90 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 MPPED1O15442 326 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 GLAP06280 429 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 GNRHRP30968 328 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 HOXA1P49639 335 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 SRYQ05066 204 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 SUMF1Q8NBK3 374 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 OR4D5Q8NGN0 318 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 EXTL1Q92935 676 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 SLAMF9Q96A28 289 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 FGF23Q9GZV9 251 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 SLC7A10Q9NS82 523 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 LUZP4Q9P127 313 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 TMED3Q9Y3Q3 217 aa17.41■□□□□ 0.38
SHKBP1-225ENST00000600733 FRYQ5TBA9 3013 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 NKX2-6A6NCS4 301 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 PRH1P02810 166 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 TDGF1P13385 188 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 GUK1Q16774 197 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 TIPARPQ7Z3E1 657 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 TECTBQ96PL2 329 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 USB1Q9BQ65 265 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 PRDM14Q9GZV8 571 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 BIN3Q9NQY0 253 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 IL36RNQ9UBH0 155 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 NOSIPQ9Y314 301 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 KPTNQ9Y664 436 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 A0A1B0GV50 99 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 HSPB6O14558 160 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 IGHEP01854 428 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 FOXO1Q12778 655 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 CT55Q8WUE5 264 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 C14orf79Q96F83 325 aa17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 EIF5A2Q9GZV4 153 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-225ENST00000600733 SMOC1Q9H4F8 434 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms