RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 IL3RAP26951 378 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 MTCP1P56278 107 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 RAET1LQ5VY80 246 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 PNKDQ8N490 385 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 TMEM217Q8N7C4 229 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 FAM222BQ8WU58 562 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 WDYHV1Q96HA8 205 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 TNS1Q9HBL0 1735 aaKnown RBP8.61□□□□□ -1.03
NFKB1-212ENST00000600343 CACNA1CQ13936 2221 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 CDIPTO14735 213 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 RPL23P62829 140 aaKnown RBP8.61□□□□□ -1.03
NFKB1-212ENST00000600343 RUNX1Q01196 453 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 DUSP2Q05923 314 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 GNMTQ14749 295 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 ZNF787Q6DD87 383 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 FIGLAQ6QHK4 219 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 VASH2Q86V25 355 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 CDC20BQ86Y33 519 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 OR5B3Q8NH48 314 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 ANAPC16Q96DE5 110 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 GNPNAT1Q96EK6 184 aaPredicted RBP8.61□□□□□ -1.03
NFKB1-212ENST00000600343 CAPNS2Q96L46 248 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 P2RX4Q99571 388 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 LRFN3Q9BTN0 628 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 VDAC3Q9Y277 283 aa8.61□□□□□ -1.03
NFKB1-212ENST00000600343 TAX1BP3O14907 124 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ST8SIA3O43173 380 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 RAMP3O60896 148 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ESDP10768 282 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ZNF10P21506 573 aaPredicted RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ADMP35318 185 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 GFRA1P56159 465 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 TRA2BP62995 288 aaKnown RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 LCN2P80188 198 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 FAM78BQ5VT40 261 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 DPY19L4Q7Z388 723 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 C20orf196Q8IYI0 205 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 SLC16A11Q8NCK7 471 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 OR2Y1Q8NGV0 311 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 CHODLQ9H9P2 273 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 PILRBQ9UKJ0 227 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 INSL6Q9Y581 213 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ENTPD2Q9Y5L3 495 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 OR6C6A6NF89 314 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 IGLON5A6NGN9 336 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 SH2D1BO14796 132 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 HPNP05981 417 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ZNF93P35789 620 aaPredicted RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 SSR2P43308 183 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 MLF1P58340 268 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 PLAURQ03405 335 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 PARS2Q7L3T8 475 aaKnown RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 CENPVQ7Z7K6 275 aaPredicted RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 LHFPL1Q86WI0 220 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 BAGE3Q86Y29 109 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 SRA1Q9HD15 236 aaKnown RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 PLA2G3Q9NZ20 509 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 FAM24AA6NFZ4 105 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 NDUFS4O43181 175 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 C1orf105O95561 183 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 SMAGPQ0VAQ4 97 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 EXT1Q16394 746 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 PTCRAQ6ISU1 281 aaPredicted RBP8.6□□□□□ -1.03
NFKB1-212ENST00000600343 LGI3Q8N145 548 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 ASB5Q8WWX0 329 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 LRIT1Q9P2V4 623 aa8.6□□□□□ -1.03
NFKB1-212ENST00000600343 HSPB2A8KAH6 182 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 NPIPB7O75200 414 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PITX3O75364 302 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 NGFRP08138 427 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 AZU1P20160 251 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 HSPB2Q16082 182 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PSG3Q16557 428 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 LCN15Q6UWW0 184 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 TPRG1Q6ZUI0 275 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 Q8N976 141 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 CNRIP1Q96F85 164 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-212ENST00000600343 SCARF2Q96GP6 870 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PTPN18Q99952 460 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 ELOVL3Q9HB03 270 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PPIAL4EA0A075B759 164 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PPIAL4CA0A0B4J2A2 164 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PPIAL4DF5H284 164 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 PPIAL4FP0DN26 164 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 CSNK1G2P78368 415 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 MRPS34P82930 218 aaKnown RBP8.59□□□□□ -1.03
NFKB1-212ENST00000600343 CDC42EP1Q00587 391 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 TAF10Q12962 218 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 UNC119Q13432 240 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 KIAA0895LQ68EN5 471 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 SULF2Q8IWU5 870 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 ZNF479Q96JC4 524 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 ZDHHC11Q9H8X9 412 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 TP53TG3Q9ULZ0 132 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms