RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 EXOSC4Q9NPD3 245 aaKnown RBP12.77□□□□□ -0.37
VRK3-221ENST00000600284 MRPS18AQ9NVS2 196 aaKnown RBP12.77□□□□□ -0.37
VRK3-221ENST00000600284 ERVK13-1Q9NX77 482 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 MYRFQ9Y2G1 1151 aa12.77□□□□□ -0.37
VRK3-221ENST00000600284 RPL36Q9Y3U8 105 aaKnown RBP12.77□□□□□ -0.37
VRK3-221ENST00000600284 IGHV2-26A0A0B4J1V2 119 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 MEGF11A6BM72 1044 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 A6NDX4 124 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 H3BUI4 141 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CHST1O43916 411 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 OR2H2O95918 312 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CSF1P09603 554 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 OR3A1P47881 315 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 DYNC1I2Q13409 638 aaKnown RBP12.76□□□□□ -0.37
VRK3-221ENST00000600284 KLHL22Q53GT1 634 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 OR52W1Q6IF63 320 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 Q8N2B8 174 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CHST4Q8NCG5 386 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 OR13C9Q8NGT0 318 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CFHR4Q92496 578 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CORO2AQ92828 525 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 SLC29A1Q99808 456 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 CLEC7AQ9BXN2 247 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 GAL3ST2Q9H3Q3 398 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 ISG20L2Q9H9L3 353 aaKnown RBP12.76□□□□□ -0.37
VRK3-221ENST00000600284 S100A14Q9HCY8 104 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 FAM118AQ9NWS6 357 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 TAS2R3Q9NYW6 316 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 AASSQ9UDR5 926 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 GSTK1Q9Y2Q3 226 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 SIGLEC9Q9Y336 463 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 DSCAML1Q8TD84 2053 aa12.76□□□□□ -0.37
VRK3-221ENST00000600284 TRGV10A0A0A0MS01 117 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
VRK3-221ENST00000600284 ZFPL1O95159 310 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 TSPAN15O95858 294 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 CSN2P05814 226 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 RAB13P51153 203 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 GBX2P52951 348 aaPredicted RBP12.75□□□□□ -0.37
VRK3-221ENST00000600284 LDLRAD2Q5SZI1 272 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 LPCAT4Q643R3 524 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 CCBE1Q6UXH8 406 aaPredicted RBP12.75□□□□□ -0.37
VRK3-221ENST00000600284 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 RTN4RL2Q86UN3 420 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 PQLC1Q8N2U9 271 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 KLHDC1Q8N7A1 406 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 OR5AK2Q8NH90 309 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 RFT1Q96AA3 541 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 VWFP04275 2813 aa12.75□□□□□ -0.37
VRK3-221ENST00000600284 A0A0G2JK05 382 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 SIRPB1O00241 398 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 SULT1B1O43704 296 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 CALCBP10092 127 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 HTR1DP28221 377 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
VRK3-221ENST00000600284 IL18R1Q13478 541 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 KISS1Q15726 138 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 CPNE2Q96FN4 548 aaPredicted RBP12.74□□□□□ -0.37
VRK3-221ENST00000600284 RDH12Q96NR8 316 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 SPACA5Q96QH8 159 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 NKX3-1Q99801 234 aaPredicted RBP12.74□□□□□ -0.37
VRK3-221ENST00000600284 JAM3Q9BX67 310 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 PRSS22Q9GZN4 317 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 AMBNQ9NP70 447 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 DHDHQ9UQ10 334 aa12.74□□□□□ -0.37
VRK3-221ENST00000600284 FAM90A22PA8MWA6 464 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 EBAG9O00559 213 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 HCKP08631 526 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 TMEM225BP0DP42 221 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 ZNF44P15621 663 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 ZP1P60852 638 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 Q6P435 159 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 RNF144BQ7Z419 303 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 ABHD12Q8N2K0 398 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 PXT1Q8NFP0 134 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 OR52I1Q8NGK6 324 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 OR5D18Q8NGL1 313 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 FAM110DQ8TAY7 271 aaPredicted RBP12.73□□□□□ -0.37
VRK3-221ENST00000600284 NDNFQ8TB73 568 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 ZNF596Q8TC21 504 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 FOXJ3Q9UPW0 622 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
VRK3-221ENST00000600284 E9PI62 339 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 F2RL2O00254 374 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 DEGS1O15121 323 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 MMP23AO75900 390 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 VSIG10L2P0DP72 767 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 MTNR1BP49286 362 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 BDH1Q02338 343 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 SLC34A1Q06495 639 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms