RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 IL36RNQ9UBH0 155 aa16.88■□□□□ 0.29
PNKP-212ENST00000599454 E9PQ18 207 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 M0R129 80 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 ENTPD6O75354 484 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 IGLV1-47P01700 117 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 UBCP0CG48 685 aaKnown RBP16.87■□□□□ 0.29
PNKP-212ENST00000599454 PRKACAP17612 351 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 BCL3P20749 454 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 NPBWR2P48146 333 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 TENM3Q9P273 2699 aa16.87■□□□□ 0.29
PNKP-212ENST00000599454 A0A1W2PQL4 384 aaPredicted RBP16.86■□□□□ 0.29
PNKP-212ENST00000599454 WI2-2373I1.2A0A1W2PRP0 233 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 OOSP1A8MZH6 123 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 H3BSH0 61 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 SH2D1BO14796 132 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 PRKACBP22694 351 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 CDK2P24941 298 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 CD24P25063 80 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 DUSP1P28562 367 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 POU3F4P49335 361 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 KRTAP10-11P60412 298 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 KHDC1LQ5JSQ8 128 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 PRAMEF5Q5TYX0 476 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 CCDC144NLQ6NUI1 221 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 C11orf87Q6NUJ2 197 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 UTP4Q969X6 686 aaKnown RBP16.86■□□□□ 0.29
PNKP-212ENST00000599454 IL4I1Q96RQ9 567 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 TBX5Q99593 518 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 ENOPH1Q9UHY7 261 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 HHLA2Q9UM44 414 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 PCDHGB5Q9Y5G0 923 aa16.86■□□□□ 0.29
PNKP-212ENST00000599454 KMT2CQ8NEZ4 4911 aaKnown RBP16.85■□□□□ 0.29
PNKP-212ENST00000599454 LOC107986453A0A1B0GWG9 222 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 MNDAP41218 407 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 MTCP1P56278 107 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 DCTN2Q13561 401 aaKnown RBP16.85■□□□□ 0.29
PNKP-212ENST00000599454 DNAL1Q4LDG9 190 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 LHFPL2Q6ZUX7 228 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 UTS2BQ765I0 119 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 OSR2Q8N2R0 312 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 LINC00482Q8N8I6 264 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 OR51D1Q8NGF3 324 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 HMG20AQ9NP66 347 aa16.85■□□□□ 0.29
PNKP-212ENST00000599454 EXOSC4Q9NPD3 245 aaKnown RBP16.85■□□□□ 0.29
PNKP-212ENST00000599454 SIRPB1O00241 398 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 TOR1AO14656 332 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 AMY1AP04745 511 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 AMY2AP04746 511 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 LMO1P25800 156 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 EPHA2P29317 976 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 HTR1FP30939 366 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 PRRX1P54821 245 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 KPNB1Q14974 876 aaKnown RBP16.84■□□□□ 0.29
PNKP-212ENST00000599454 HLA-DRB5Q30154 266 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 FAM220AQ7Z4H9 259 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 PRSS35Q8N3Z0 413 aa16.84■□□□□ 0.29
PNKP-212ENST00000599454 A0A087X0M5 115 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 A0A1B0GX30 115 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 BUB1B-PAK6H3BSN5 160 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 MITFO75030 526 aaPredicted RBP16.83■□□□□ 0.28
PNKP-212ENST00000599454 OR2H2O95918 312 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 CSN2P05814 226 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 ATF1P18846 271 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 SNU13P55769 128 aaKnown RBP16.83■□□□□ 0.28
PNKP-212ENST00000599454 CD69Q07108 199 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 PDZK1IP1Q13113 114 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 TMED1Q13445 227 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 TPTE2P1Q5T6R2 138 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 TMEM244Q5VVB8 128 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 BAIAP2L2Q6UXY1 529 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 OR10H4Q8NGA5 316 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 OR4D6Q8NGJ1 314 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 SPSB1Q96BD6 273 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 B9D2Q9BPU9 175 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 MCRIP2Q9BUT9 160 aaKnown RBP16.83■□□□□ 0.28
PNKP-212ENST00000599454 COMMD4Q9H0A8 199 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 RHOFQ9HBH0 211 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 ZNF286AQ9HBT8 521 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 PCDHB16Q9NRJ7 776 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 POMPQ9Y244 141 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 GSTK1Q9Y2Q3 226 aa16.83■□□□□ 0.28
PNKP-212ENST00000599454 IGKV1-9A0A0C4DH69 117 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 PSMB11A5LHX3 300 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 G3V2T6 193 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 LY6LH3BQJ8 138 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 GYG2O15488 501 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 FAM106CPP0CH98 169 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 SLC6A1P30531 599 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 PTGFRP43088 359 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 C9orf152Q5JTZ5 239 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 KDM4DQ6B0I6 523 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 C10orf99Q6UWK7 81 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 BCAS4Q8TDM0 211 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 ADAT3Q96EY9 351 aaPredicted RBP16.82■□□□□ 0.28
PNKP-212ENST00000599454 WWC2-AS2Q96NR7 200 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 OPALINQ96PE5 141 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 MOB4Q9Y3A3 225 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 HSPE1-MOB4S4R3N1 261 aa16.82■□□□□ 0.28
PNKP-212ENST00000599454 ODAMA1E959 279 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 ZNF729A6NN14 1252 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms