RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	C6orf120	Q7Z4R8	191 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	LRRC28	Q86X40	367 aa	Predicted RBP	4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	OSR2	Q8N2R0	312 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	FAM24B	Q8N5W8	94 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	ZNF441	Q8N8Z8	693 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	OR4M1	Q8NGD0	313 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	OR52L1	Q8NGH7	329 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	OR10G8	Q8NGN5	311 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	LRRC29	Q8WV35	223 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	BTN2A3P	Q96KV6	586 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	FAM19A4	Q96LR4	140 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	C9orf85	Q96MD7	179 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	OR52B2	Q96RD2	323 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	METTL26	Q96S19	204 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	ULBP3	Q9BZM4	244 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	NANOG	Q9H9S0	305 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	HMG20A	Q9NP66	347 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	DEPP	Q9NTK1	212 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	TAAR2	Q9P1P5	351 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	RBM7	Q9Y580	266 aa	Known RBP	4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	INSL5	Q9Y5Q6	135 aa		4.22	□□□□□ -1.73
PAF1-208	ENST00000598594	KIF13B	Q9NQT8	1826 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	MYH7	P12883	1935 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	LRRK1	Q38SD2	2015 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	IGLV5-37	A0A075B6J1	123 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	SAA2-SAA4	A0A096LPE2	208 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	IGLV1-36	A0A0B4J1U3	117 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594		A0A1B0GVG6	124 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	PVALEF	A0A1B0GWK0	134 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	MSGN1	A6NI15	193 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	KRTAP9-7	A8MTY7	169 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594		D6RAR5	112 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594		I3L4J1	428 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	RFXAP	O00287	272 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	XKRY	O14609	159 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	TPST1	O60507	370 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	CRLF1	O75462	422 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	POP7	O75817	140 aa	Known RBP	4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	C6orf47	O95873	294 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	TSHB	P01222	138 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	EDN1	P05305	212 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	ZNF25	P17030	456 aa	Predicted RBP	4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	RAB3A	P20336	220 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	LGALS7	P47929	136 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	GTF2B	Q00403	316 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	PMAIP1	Q13794	54 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	IHH	Q14623	411 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	AVPI1	Q5T686	147 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	FBXL22	Q6P050	247 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	GSG1L	Q6UXU4	331 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	DGAT2L6	Q6ZPD8	337 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	NPW	Q8N729	165 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	SLC35G3	Q8N808	338 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	OR4D11	Q8NGI4	311 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	OR10G4	Q8NGN3	311 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	OR1N2	Q8NGR9	330 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	ZNRF2	Q8NHG8	242 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	AURKB	Q96GD4	344 aa	Predicted RBP	4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	ACY3	Q96HD9	319 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	FMC1	Q96HJ9	113 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	SLC45A3	Q96JT2	553 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	OR2M4	Q96R27	311 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	OR52E6	Q96RD3	313 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	PLEKHF1	Q96S99	279 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	SRXN1	Q9BYN0	137 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	SLC17A9	Q9BYT1	436 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	YIPF3	Q9GZM5	350 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	SLIRP	Q9GZT3	109 aa	Known RBP	4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	PLSCR3	Q9NRY6	295 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	C14orf105	Q9NVL8	296 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	OCIAD1	Q9NX40	245 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM53C	Q9NYF3	392 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	VSIG4	Q9Y279	399 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	KCNE3	Q9Y6H6	103 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	EIF4G3	O43432	1585 aa	Known RBP	4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	ADAMTSL1	Q8N6G6	1762 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	ASTN1	O14525	1302 aa		4.21	□□□□□ -1.74
PAF1-208	ENST00000598594	TRAV8-2	A0A0B4J237	113 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594		A0A0G2JRQ6	117 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM236D	A0A1B0GTK5	79 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	TEX50	A0A1B0GTY4	177 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM172BP	A6NC97	362 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	GMNC	A6NCL1	334 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	C12orf77	C9JDV5	145 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594		E7EQ34	232 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594		G3V2T6	193 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594		H7C417	338 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	ARL6IP5	O75915	188 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	S100A8	P05109	93 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	SNRPC	P09234	159 aa	Known RBP	4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	OR5H8	P0DN80	308 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	FAM236C	P0DP71	79 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	AGTR1	P30556	359 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	DRD3	P35462	400 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	KLK7	P49862	253 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	C1D	Q13901	141 aa	Known RBP	4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	MUC21	Q5SSG8	566 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	AKR1C8P	Q5T2L2	129 aa		4.2	□□□□□ -1.74
PAF1-208	ENST00000598594	LCE5A	Q5TCM9	118 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms