RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PSPNO60542 156 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 OR2H2O95918 312 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 PRTN3P24158 256 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 ZNF93P35789 620 aaPredicted RBP11.36□□□□□ -0.59
UPF1-205ENST00000598209 TGFBR2P37173 567 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 OR3A4PP47883 348 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 MTNR1BP49286 362 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 BMXP51813 675 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
UPF1-205ENST00000598209 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 BAMBIQ13145 260 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 KLRD1Q13241 179 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 EDDM3AQ14507 147 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 ZNF273Q14593 569 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 GRK1Q15835 563 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.36□□□□□ -0.59
UPF1-205ENST00000598209 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 TNFRSF14Q92956 283 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 DUX5Q96PT3 197 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 ZNF184Q99676 751 aaPredicted RBP11.36□□□□□ -0.59
UPF1-205ENST00000598209 CHST6Q9GZX3 395 aa11.36□□□□□ -0.59
UPF1-205ENST00000598209 MAGEA13PA6NCF6 341 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 PIN1P1O15428 100 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 ZNF44P15621 663 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 CCL3L1P16619 93 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 MAPK3P27361 379 aaPredicted RBP11.35□□□□□ -0.59
UPF1-205ENST00000598209 PTGFRP43088 359 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 OR3A1P47881 315 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 SCN1BQ07699 218 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 RSU1Q15404 277 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 NCR3LG1Q68D85 454 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 ELP2Q6IA86 826 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 ASCL4Q6XD76 172 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 PRSS48Q7RTY5 328 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 OR4S1Q8NGB4 309 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 OR10K1Q8NGX5 313 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 THRSPQ92748 146 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 C1orf147Q96MC9 270 aaPredicted RBP11.35□□□□□ -0.59
UPF1-205ENST00000598209 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 UNKLQ9H9P5 680 aaKnown RBP11.35□□□□□ -0.59
UPF1-205ENST00000598209 NOX4Q9NPH5 578 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 BLOC1S6Q9UL45 172 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 ING4Q9UNL4 249 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 FOXJ3Q9UPW0 622 aa11.35□□□□□ -0.59
UPF1-205ENST00000598209 A0A0U1RQK1 487 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 A0A1W2PRD5 423 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 A0A1W2PRF3 423 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 A0A1W2PRM7 423 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 MEX3AA1L020 520 aaKnown RBP11.34□□□□□ -0.59
UPF1-205ENST00000598209 MGST3O14880 152 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 CDRT1O95170 752 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 HTR3BO95264 441 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 MAS1P04201 325 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 EEF1B2P24534 225 aaKnown RBP11.34□□□□□ -0.59
UPF1-205ENST00000598209 LMO1P25800 156 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 MAP2K4P45985 399 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 GPR50Q13585 617 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 INSL4Q14641 139 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 ACSM3Q53FZ2 586 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 Q6P435 159 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 C11orf42Q8N5U0 333 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 MS4A15Q8N5U1 240 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 TPRX1Q8N7U7 411 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 UFD1Q92890 307 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 NR1H4Q96RI1 486 aaPredicted RBP11.34□□□□□ -0.59
UPF1-205ENST00000598209 TMED9Q9BVK6 235 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 METTL9Q9H1A3 318 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 Q9H521 79 aa11.34□□□□□ -0.59
UPF1-205ENST00000598209 A0A0G2JK05 382 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 hCG_1809904A0A1W2PP81 198 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 A0A1W2PPE2 198 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 A0A1W2PR64 198 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 A0A1W2PRV1 198 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 SLC33A1O00400 549 aaPredicted RBP11.33□□□□□ -0.6
UPF1-205ENST00000598209 DEGS1O15121 323 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 NPFFO15130 113 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 HSMCR30P0CW71 290 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 UBE2E1P51965 193 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 DLX6P56179 175 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.6
UPF1-205ENST00000598209 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 SLC9A3R2Q15599 337 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 LIPKQ5VXJ0 399 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 HCP5Q6MZN7 132 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 UNQ9370/PRO34162Q6UXP9 181 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 Q6YL49 198 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 PNKDQ8N490 385 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 JAGN1Q8N5M9 183 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 CHST4Q8NCG5 386 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 Q8NFD4 153 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 OR51T1Q8NGJ9 327 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 S100A13Q99584 98 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 PPA2Q9H2U2 334 aa11.33□□□□□ -0.6
UPF1-205ENST00000598209 ZMAT3Q9HA38 289 aaKnown RBP11.33□□□□□ -0.6
UPF1-205ENST00000598209 ISYNA1Q9NPH2 558 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms