RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	OR2G2	Q8NGZ5	317 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	OR10AC1	Q8NH08	325 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	BCAS4	Q8TDM0	211 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	PP6455	Q8WZ26	134 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	FGGY	Q96C11	551 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	C10orf35	Q96D05	121 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	SPACA5	Q96QH8	159 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	SEBOX	Q9HB31	216 aa	Predicted RBP	8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	HMG20A	Q9NP66	347 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	DPM3	Q9P2X0	92 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	GSTK1	Q9Y2Q3	226 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	UBE2J1	Q9Y385	318 aa	Predicted RBP	8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	TRGV10	A0A0A0MS01	117 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	MPIG6B	O95866	241 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	OR2H2	O95918	312 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	LPL	P06858	475 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF20	P17024	532 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ERP29	P30040	261 aa	Known RBP	8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	GLIPR1	P48060	266 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	NANOS3	P60323	173 aa	Known RBP	8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	SCN1B	Q07699	218 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	AES	Q08117	197 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	PDZK1IP1	Q13113	114 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	IL18R1	Q13478	541 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ABCA11P	Q4W5N1	156 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	SPIN3	Q5JUX0	258 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	UTF1	Q5T230	341 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ZBTB49	Q6ZSB9	765 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	LHFPL2	Q6ZUX7	228 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	UTS2B	Q765I0	119 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	CENPV	Q7Z7K6	275 aa	Predicted RBP	8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	OR51A4	Q8NGJ6	313 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	OR5D18	Q8NGL1	313 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	OR8J1	Q8NGP2	316 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	SLC25A33	Q9BSK2	321 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	GABARAPL3	Q9BY60	117 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF286A	Q9HBT8	521 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	EXOSC4	Q9NPD3	245 aa	Known RBP	8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ING3	Q9NXR8	418 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	FRRS1L	Q9P0K9	344 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ENOPH1	Q9UHY7	261 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	GLS2	Q9UI32	602 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	OAZ3	Q9UMX2	235 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF281	Q9Y2X9	895 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	AP4S1	Q9Y587	144 aa		8.41	□□□□□ -1.06
LSM4-205	ENST00000597776	TCRBV4S1A1T	A0A5B7	111 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	SAC3D1	A6NKF1	404 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	SH2D1B	O14796	132 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	IGLV1-47	P01700	117 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	PF4	P02776	101 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	AMY1A	P04745	511 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	AMY2A	P04746	511 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	OCM2	P0CE71	109 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	OCM	P0CE72	109 aa	Predicted RBP	8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	PRKACB	P22694	351 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	CDC42	P60953	191 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	BDH1	Q02338	343 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	KHDC1L	Q5JSQ8	128 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	TMEM244	Q5VVB8	128 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	HEPN1	Q6WQI6	88 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	C16orf82	Q7Z2V1	217 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	WFDC9	Q8NEX5	89 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	OR13C3	Q8NGS6	347 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	OR13C9	Q8NGT0	318 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	CAPSL	Q8WWF8	208 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	STMN2	Q93045	179 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	RFK	Q969G6	155 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	MYDGF	Q969H8	173 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	SPSB1	Q96BD6	273 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	COQ2	Q96H96	371 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	AKR1E2	Q96JD6	320 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	OPALIN	Q96PE5	141 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	MBOAT4	Q96T53	435 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	GAL3ST2	Q9H3Q3	398 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	LIN7B	Q9HAP6	207 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	NEK6	Q9HC98	313 aa		8.4	□□□□□ -1.06
LSM4-205	ENST00000597776	COL7A1	Q02388	2944 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	ODAM	A1E959	279 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	LEUTX	A8MZ59	168 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776		H3BUI4	141 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776		K7EIL1	84 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	SLC16A6	O15403	523 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	KDM4B	O94953	1096 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	OR2F2	O95006	317 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	ISG15	P05161	165 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	ZNF44	P15621	663 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	CD34	P28906	385 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	BRS3	P32247	399 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	PTGFR	P43088	359 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	OR3A4P	P47883	348 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	BNIP1	Q12981	228 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	TMED1	Q13445	227 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	RBM39	Q14498	530 aa	Known RBP	8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	KPNB1	Q14974	876 aa	Known RBP	8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	ATXN7L3	Q14CW9	347 aa	Predicted RBP	8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	KRBOX4	Q5JUW0	171 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	TPTE2P1	Q5T6R2	138 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	C1orf146	Q5VVC0	180 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	OR52W1	Q6IF63	320 aa		8.39	□□□□□ -1.07
LSM4-205	ENST00000597776	RTN4RL2	Q86UN3	420 aa		8.39	□□□□□ -1.07

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