RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SNX22Q96L94 193 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 PCGF1Q9BSM1 259 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 PPIL3Q9H2H8 161 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 PCDHB16Q9NRJ7 776 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 IL36GQ9NZH8 169 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 ONECUT1Q9UBC0 465 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 ZNF780AO75290 641 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 ZNF737O75373 536 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 TOX4O94842 621 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 OR2H2O95918 312 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 SCGB2A2Q13296 93 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 SLC22A6Q4U2R8 563 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 GDPD3Q7L5L3 318 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 LRRTM1Q86UE6 522 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 CMTM4Q8IZR5 234 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 LY6G5BQ8NDX9 201 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 OR5D13Q8NGL4 314 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 FOXRED1Q96CU9 486 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 DMRTB1Q96MA1 342 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 UQCC2Q9BRT2 126 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 VCX3AQ9NNX9 186 aa16.23■□□□□ 0.19
SHKBP1-214ENST00000597396 KIAA2026Q5HYC2 2103 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 A0A087WXM4 84 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 TMEM82A0PJX8 343 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 CALRP27797 417 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 RPL31P62899 125 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 GPR176Q14439 515 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 IL13RA2Q14627 380 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 GRK1Q15835 563 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 GLIPR1L1Q6UWM5 242 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 OR8H2Q8N162 312 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 OSR2Q8N2R0 312 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 TSPAN14Q8NG11 270 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 OR4M1Q8NGD0 313 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 UPRTQ96BW1 309 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 WDFY2Q96P53 400 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 CHST6Q9GZX3 395 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 KPTNQ9Y664 436 aa16.22■□□□□ 0.19
SHKBP1-214ENST00000597396 ATRQ13535 2644 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 TRAV40A0A0B4J280 105 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 TRDV1A0A1B0GX56 115 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 DEGS1O15121 323 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 IFNA2P01563 188 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 EPHA1P21709 976 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 EDDM3BP56851 147 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 EDDM3AQ14507 147 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 C17orf107Q6ZR85 190 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 KIR3DL3Q8N743 410 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 CHST4Q8NCG5 386 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 Q8NFD4 153 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 OR4D6Q8NGJ1 314 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 OR51T1Q8NGJ9 327 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 SIRPDQ9H106 197 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 C19orf12Q9NSK7 152 aa16.21■□□□□ 0.19
SHKBP1-214ENST00000597396 A0A1W2PPH5 198 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 PSPNO60542 156 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 FSHBP01225 129 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 GTF2F2P13984 249 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 BLMHQ13867 455 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 PDCD1Q15116 288 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 PIGYQ3MUY2 71 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 SYT6Q5T7P8 510 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 Q6P435 159 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 LYPD6Q86Y78 171 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 OR4S1Q8NGB4 309 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 TBC1D15Q8TC07 691 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 PPA2Q9H2U2 334 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 ZNF696Q9H7X3 374 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 NUP50Q9UKX7 468 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 ST3GAL6Q9Y274 331 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 COL6A5A8TX70 2615 aa16.2■□□□□ 0.18
SHKBP1-214ENST00000597396 IGHV3OR16-10A0A075B7F0 116 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 A0A1W2PP11 408 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 MGST3O14880 152 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 MMP9P14780 707 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 GALP22466 123 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 MYL9P24844 172 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 LMO1P25800 156 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 OR3A1P47881 315 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 RBM11P57052 281 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 KLF17Q5JT82 389 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 CD200R1LQ6Q8B3 271 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 TBX15Q96SF7 602 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 PLGRKTQ9HBL7 147 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 STUB1Q9UNE7 303 aa16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 AK6Q9Y3D8 172 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-214ENST00000597396 M0R1W7 72 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 SLC33A1O00400 549 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 IGHV4-38-2P0DP08 117 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 HTR2CP28335 458 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 PAN3Q58A45 887 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 NHLRC3Q5JS37 347 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 C1orf100Q5SVJ3 147 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 GPR157Q5UAW9 335 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 C22orf42Q6IC83 251 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 VMO1Q7Z5L0 202 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 LINC00596Q86U02 117 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 SPATA3Q8NHX4 192 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 OCEL1Q9H607 264 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 SIRT7Q9NRC8 400 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms