RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 BTN2A1Q7KYR7 527 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 LINC00596Q86U02 117 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 FGFRL1Q8N441 504 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 CHST4Q8NCG5 386 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 OR5D13Q8NGL4 314 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 PPP1R35Q8TAP8 253 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 SNX22Q96L94 193 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 RNF167Q9H6Y7 350 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 STEAP1Q9UHE8 339 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 ST3GAL6Q9Y274 331 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 WNK2Q9Y3S1 2297 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 IGHV2-70DA0A0C4DH43 119 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 A0A0G2JMP0 313 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 A0A0X1KG70 313 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 IFITM5A6NNB3 132 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 NOTOA8MTQ0 251 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 A8MV72 311 aaPredicted RBP11.9□□□□□ -0.5
VRK3-213ENST00000597215 C22orf46C9J442 243 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 K7N7A8 449 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 AIPO00170 330 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 SIRPB1O00241 398 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 DEGS1O15121 323 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
VRK3-213ENST00000597215 ZNF737O75373 536 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 VSIG8P0DPA2 414 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 ARSBP15848 533 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 MGMTP16455 207 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 GABRR1P24046 479 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 CFPP27918 469 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 RPL5P46777 297 aaKnown RBP11.9□□□□□ -0.5
VRK3-213ENST00000597215 LSM3P62310 102 aaKnown RBP11.9□□□□□ -0.5
VRK3-213ENST00000597215 PAX2Q02962 417 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 SCN1BQ07699 218 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 P2RY14Q15391 338 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 HES5Q5TA89 166 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 Q6P435 159 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 BTNL3Q6UXE8 466 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 ANKRD13BQ86YJ7 626 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 OR8H2Q8N162 312 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 OR4M2Q8NGB6 313 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 RAB40AQ8WXH6 277 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 H1FXQ92522 213 aaKnown RBP11.9□□□□□ -0.5
VRK3-213ENST00000597215 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 NUDT16L1Q9BRJ7 211 aaKnown RBP11.9□□□□□ -0.5
VRK3-213ENST00000597215 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 BANF2Q9H503 90 aa11.9□□□□□ -0.5
VRK3-213ENST00000597215 TEP1Q99973 2627 aaKnown RBP11.89□□□□□ -0.51
VRK3-213ENST00000597215 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 TMEM82A0PJX8 343 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 SMIM30A4D0T7 59 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A10PA6NDY2 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A18PA6NE21 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A16PA6NEW6 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A20PA6NIJ5 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A7PA6NKC0 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A22PA8MWA6 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A12PA8MX19 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A5PA8MXJ8 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A23PA8MXZ1 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 J3QLI3 93 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 GEMIN2O14893 280 aaKnown RBP11.89□□□□□ -0.51
VRK3-213ENST00000597215 PSPNO60542 156 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 OR7C1O76099 320 aaPredicted RBP11.89□□□□□ -0.51
VRK3-213ENST00000597215 GABARAPO95166 117 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 MPIG6BO95866 241 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A15PP0C7V4 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A13PP0C7W8 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A14PP0C7W9 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM90A24PP0C7X0 464 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 LMO1P25800 156 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 MXD1Q05195 221 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 GPR107Q5VW38 600 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 C17orf107Q6ZR85 190 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 GDPD3Q7L5L3 318 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 NR2C2APQ86WQ0 139 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 TMEM104Q8NE00 496 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 C8orf46Q8TAG6 207 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM46BQ96A09 425 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 DACT3Q96B18 629 aaPredicted RBP11.89□□□□□ -0.51
VRK3-213ENST00000597215 FAM3DQ96BQ1 224 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 Q96M66 194 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 TMEM59Q9BXS4 323 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 SELENOIQ9C0D9 397 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 IFT22Q9H7X7 185 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 RPUSD1Q9UJJ7 312 aaKnown RBP11.89□□□□□ -0.51
VRK3-213ENST00000597215 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
VRK3-213ENST00000597215 A0A0G2JK05 382 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 KIR2DS1A0A191URI9 304 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
VRK3-213ENST00000597215 MGST3O14880 152 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 LIPFP07098 398 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 OR3A1P47881 315 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 CLDN12P56749 244 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms