RNA–Protein interactions for RNA: ENST00000596822.5

IRF3-215, Transcript of interferon regulatory factor 3, human

TSL 3 BASIC

Gene IRF3, Length 823 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-215	ENST00000596822	TPRX1	Q8N7U7	411 aa		11.66	□□□□□ -0.54
IRF3-215	ENST00000596822	LINC01006	Q8NI28	216 aa		11.66	□□□□□ -0.54
IRF3-215	ENST00000596822	C17orf50	Q8WW18	174 aa		11.66	□□□□□ -0.54
IRF3-215	ENST00000596822	JAM3	Q9BX67	310 aa		11.66	□□□□□ -0.54
IRF3-215	ENST00000596822	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.66	□□□□□ -0.54
IRF3-215	ENST00000596822	LINC00312	Q9Y6C7	94 aa		11.66	□□□□□ -0.54
IRF3-215	ENST00000596822	TET2	Q6N021	2002 aa	Predicted RBP	11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	MGAM2	Q2M2H8	2515 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	KDM4B	O94953	1096 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	IGHV1-8	P0DP01	117 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	SOX2	P48431	317 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	GTF2A1	P52655	376 aa	Predicted RBP	11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	KISS1	Q15726	138 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	CCDC58	Q4VC31	144 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822		Q6ZSV7	163 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	OR4S1	Q8NGB4	309 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	OR52N4	Q8NGI2	321 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	GPR148	Q8TDV2	347 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	ZNF649	Q9BS31	505 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	MEGF9	Q9H1U4	602 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	RAB18	Q9NP72	206 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	ABCB10	Q9NRK6	738 aa		11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	TBL2	Q9Y4P3	447 aa	Known RBP	11.65	□□□□□ -0.54
IRF3-215	ENST00000596822	TRGV10	A0A0A0MS01	117 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	IGKV1-12	A0A0C4DH73	117 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	TIMM23	O14925	209 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	PSPN	O60542	156 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	CLPX	O76031	633 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	ALX3	O95076	343 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	OR2H2	O95918	312 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	IGKV1D-12	P01611	117 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	PAX6	P26367	422 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	ERP29	P30040	261 aa	Known RBP	11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	OR3A1	P47881	315 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	P2RX3	P56373	397 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	SRSF4	Q08170	494 aa	Known RBP	11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	IL18R1	Q13478	541 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	CDK5R1	Q15078	307 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	AANAT	Q16613	207 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	PLA1A	Q53H76	456 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	OR2G6	Q5TZ20	316 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	OR4C13	Q8NGP0	309 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	TMEM80	Q96HE8	168 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	FAM192A	Q9GZU8	254 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	VCX	Q9H320	206 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	GAL3ST2	Q9H3Q3	398 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	C16orf95	Q9H693	158 aa		11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	DIMT1	Q9UNQ2	313 aa	Known RBP	11.64	□□□□□ -0.55
IRF3-215	ENST00000596822	DEGS1	O15121	323 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	MTNR1B	P49286	362 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	PPP3R1	P63098	170 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	FAM189A2	Q15884	450 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	TREML4	Q6UXN2	200 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	LIAT1	Q6ZQX7	453 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	RNF144B	Q7Z419	303 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	LHFPL4	Q7Z7J7	247 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	CHST4	Q8NCG5	386 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	NDNF	Q8TB73	568 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	TNFAIP8L1	Q8WVP5	186 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	TMEM106A	Q96A25	262 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	AJUBA	Q96IF1	538 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	NR1H4	Q96RI1	486 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	TCF7L1	Q9HCS4	588 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	TAS2R4	Q9NYW5	299 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	SESN1	Q9Y6P5	492 aa		11.63	□□□□□ -0.55
IRF3-215	ENST00000596822	ODF3B	A8MYP8	253 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822		M0QZ24	198 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	TSPAN9	O75954	239 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	GABRA5	P31644	462 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	ADARB1	P78563	741 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	AES	Q08117	197 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	RSU1	Q15404	277 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	SSX2	Q16385	188 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	ZNF626	Q68DY1	528 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	XAF1	Q6GPH4	301 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	SLC35E4	Q6ICL7	350 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	OR52W1	Q6IF63	320 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	TCF23	Q7RTU1	214 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	DTX3	Q8N9I9	347 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	OR11H6	Q8NGC7	330 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	RPS4Y2	Q8TD47	263 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	RGP1	Q92546	391 aa	Predicted RBP	11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	SMIM19	Q96E16	107 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	MALSU1	Q96EH3	234 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	S100A13	Q99584	98 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	NKX3-1	Q99801	234 aa	Predicted RBP	11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	CITED1	Q99966	193 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	CLEC7A	Q9BXN2	247 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	TMEM133	Q9H2Q1	129 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	BABAM2	Q9NXR7	383 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	ING3	Q9NXR8	418 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	ZNF281	Q9Y2X9	895 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	HSPE1-MOB4	S4R3N1	261 aa		11.62	□□□□□ -0.55
IRF3-215	ENST00000596822	IGHV2-26	A0A0B4J1V2	119 aa		11.61	□□□□□ -0.55
IRF3-215	ENST00000596822		A0A0G2JK05	382 aa		11.61	□□□□□ -0.55
IRF3-215	ENST00000596822	EFCAB10	A6NFE3	127 aa		11.61	□□□□□ -0.55
IRF3-215	ENST00000596822	GABRP	O00591	440 aa		11.61	□□□□□ -0.55

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